Table 2 List of selected cellulose binding domains.
From: Combinatorial optimization of the hybrid cellulase complex structure designed from modular libraries
No | CBD | Source | CBMF | Structure | N or C terminal | Specificity |
|---|---|---|---|---|---|---|
1 | CBD1-1 | Cel6A(CelA) from Neocallimastix patriciarum J11 | 1 | Cysteine knot | N | Crystalline |
2 | CBD1-2 | Cel6A(CBH II) from Trichoderma reesei QM9414 | 1 | Cysteine knot | N | Crystalline |
3 | CBD1-3 | Cel7A(CBH I) from Trichoderma reesei L27 | 1 | Cysteine knot | C | Crystalline |
4 | CBD1-4 | Cel5A(EG II) from Trichoderma reesei | 1 | Cysteine knot | N | Crystalline |
5 | CBD1-5 | Cel7B(EG I) from Trichoderma reesei | 1 | Cysteine knot | C | Crystalline |
6 | CBD2-1 | Cel48A (CBH B) from Cellulomonas fimi ATCC 484 | 2 | β-sandwich | C | Crystalline |
7 | CBD2-2 | Cel45A from Cellvibrio japonicus Ueda107 | 2 | β-sandwich | N | Crystalline |
8 | CBD2-3 | Cel6A(E2) from Thermobifida fusca YX | 2 | β-sandwich | C | Crystalline |
9 | CBD2-4 | Cel6B(E3) from Thermobifida fusca YX | 2 | β-sandwich | N | Crystalline |
10 | CBD2-5 | Cel48A (E6) from Thermobifida fusca YX | 2 | β-sandwich | N | Crystalline |
11 | CBD2-6 | Cel9A(E4) from Thermobifida fusca YX | 2 | β-sandwich | C | Crystalline |
12 | CBD3-1 | CipA from Ruminiclostridium thermocellum | 3 | β-sandwich | N | Crystalline |
13 | CBD3-2 | Cel48B (CelY) from Ruminiclostridium thermocellum ATCC27405 | 3 | β-sandwich | C | Crystalline |
14 | CBD3-3 | Cel9A(E4) from Thermobifida fusca YX | 3 | β-sandwich | N | Crystalline |
15 | CBD4-1 | CenC N2 from Cellulomonas fimi 484 | 4 | β-sandwich | N | Amorphous |
16 | CBD4-2 | Cel9K from Ruminiclostridium thermocellum ATCC 27,405 | 4 | β-sandwich | N | Amorphous |
17 | CBD6 | Cel5A (EGB) from Cellvibrio mixtus ATCC 12,120 | 6 | β-sandwich | C | β-1,3–1,4-glucan |
18 | CBD8 | CelA from Dictyostelium discoideum | 8 | Unknown | C | Cellulose |
19 | CBD9 | Xyn10B from Ruminiclostridium stercorarium | 9 | β-sandwich | C | Cello-oligosaccharide |
20 | CBD10 | Cel45A (EGB) from Cellvibrio japonicus Ueda107 | 10 | OB-fold | N | Crystalline |
21 | CBD11 | EG/ β-1,3:1,4-glucanase H (CelH) from Ruminiclostridium thermocellum NCIB 10,682 | 11 | β-sandwich | C | Amorphous |
22 | CBD17-1 | Cel5A(EGF) from Ruminiclostridium cellulovorans | 17 | β-sandwich | N | Amorphous |
23 | CBD30 | Cel51A from Fibrobacter succinogenes subsp. succinogenes S85 | 30 | – | N | Cellulose |
24 | CBD37 | Cel9D from Ruminococcus albus 20 | 37 | Unknown | C | Crystalline |
25 | CBD44 | Cel9D-Cel44A (CelJ,) from Ruminiclostridium thermocellum F1 | 44 | – | C | Cellulose |
26 | CBD46 | CelB from Bacillus halodurans C-125 | 46 | Unknown | C | Cellulose |
27 | CBD49 | EG 8 from Solanum lycopersicum | 49 | Unknown | C | Crystalline |
28 | CBD63 | Expansin (Exlx1) from Bacillus subtilis subsp. subtilis str. 168 | 63 | Double-psi-β-barrel fold Ig like folds | ND | Crystalline |
29 | CBD64 | STHERM_c20640 (ADN02998.1) from Spirochaeta thermophila DSM 6192 | 64 | Unknown | C | Crystalline |
30 | CBDN.C | Cellulose binding protein (Cbp1) ADD62691.1 from Heterodera avenae | N.C | Unknown | ND | Cellulose |