Table 6 Summary of binding affinities and associated energetic terms, presented in kcal/mol. These values are derived from the analysis of 100 ns molecular dynamics (MD) trajectories for the investigated protein-ligand complexes. The data is present as average ± S.D.
Energy term | CUR-MMP9 | ELE-MMP9 |
|---|---|---|
\(\:{{\Delta\:}\text{G}}_{gas}\) | -96.33 ± 5.69 | -31.78 ± 1.64 |
\(\:{{\Delta\:}\text{G}}_{solv}^{GBSA}\) | 51.42 ± 4.09 | 4.92 ± 0.74 |
\(\:{{\Delta\:}\text{G}}_{solv}^{PBSA}\) | 90.17 ± 4.71 | 32.74 ± 2.63 |
\(\:{{\Delta\:}\text{G}}_{GBSA}\) | -44.92 ± 3.22 | -26.87 ± 1.66 |
\(\:{{\Delta\:}\text{G}}_{PBSA}\) | -6.16 ± 4.71 | 0.96 ± 2.98 |