Table 4 Barcode sample ID and total read count, sample type and disease condition (Control = non-diseased brain, Disease = AD/PD brain, negative = negative control, positive = positive control).
From: Detection of fungal sequences in human brain: rDNA locus amplification and deep sequencing
Barcode | Total read count | Sample | Sample type | Condition |
|---|---|---|---|---|
0 | 3438 | C2.1 | Brain | Control |
1 | 3667 | C2.2 | Brain | Control |
10 | 403 | BSA 1 | DNA free | Negative |
11 | 23,914 | Mycobiome Mix | Mock community | Positive |
12 | 667 | PD1 | Brain | Disease |
13 | 665 | AD3 | Brain | Disease |
14 | 461 | C4 | Brain | Control |
15 | 573 | PD2 | Brain | Disease |
16 | 749 | AD4 | Brain | Disease |
17 | 103 | BSA 2 | DNA free | Negative |
18 | 388 | DNA extraction kit control | DNA free | Negative |
19 | 56,262 | Spiked DNA | Mock community | Positive |
2 | 1438 | C2.3 | Brain | Control |
3 | 1393 | C1 | Brain | Control |
4 | 263 | AD1_1 | Brain | Disease |
5 | 10,171 | AD1_2 | Brain | Disease |
6 | 7543 | C3_1 | Brain | Control |
7 | 285 | C3_2 | CSF | Control |
8 | 12,307 | AD2_1 | Brain | Disease |
9 | 2366 | AD2_2 | CSF | Disease |
