Table 1 Putative LTPs isolated from the genome of S. Bicolor. The composition of the 8CM and some physicochemical characteristics of the LTPs are detailed in the table. The intron position corresponds to the number of nucleotides from the codon corresponding to the last cysteine of the 8CM to the intron. The accession number of the locus corresponding to each protein is detailed in supplementary table S2.
Protein Name | Full protein | Mature peptide (aa) | pI | MW | GPI anchor signal | Intron number | Intron position * | Eight Cysteine Motif (ECM) | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Type 1 | ||||||||||||||||||||||
SbLTP1.1 | 135 | 107 | 5.52 | 10782.49 | No | 1 | 5 | C1 | 9 | C2 | 15 | C3 | 0 | C4 | 19 | C5 | 1 | C6 | 22 | C7 | 13 | C8 |
SbLTP1.2 | 124 | 95 | 8.91 | 9900.48 | No | 1 | 5 | C1 | 9 | C2 | 14 | C3 | 0 | C4 | 19 | C5 | 1 | C6 | 21 | C7 | 13 | C8 |
SbLTP1.3 | 126 | 93 | 6.34 | 9713.10 | No | 1 | 5 | C1 | 9 | C2 | 14 | C3 | 0 | C4 | 19 | C5 | 1 | C6 | 22 | C7 | 13 | C8 |
SbLTP1.4 | 124 | 93 | 9.10 | 9071.23 | No | 1 | 5 | C1 | 9 | C2 | 14 | C3 | 0 | C4 | 19 | C5 | 1 | C6 | 22 | C7 | 13 | C8 |
SbLTP1.5 | 120 | 93 | 9.30 | 9142.27 | No | 0 | - | C1 | 9 | C2 | 14 | C3 | 0 | C4 | 19 | C5 | 1 | C6 | 22 | C7 | 13 | C8 |
SbLTP1.6 | 127 | 96 | 8.74 | 9350.65 | No | 1 | 5 | C1 | 9 | C2 | 14 | C3 | 0 | C4 | 19 | C5 | 1 | C6 | 25 | C7 | 13 | C8 |
SbLTP1.7 | 116 | 92 | 4.56 | 9707.09 | No | 1 | 5 | C1 | 9 | C2 | 14 | C3 | 0 | C4 | 19 | C5 | 1 | C6 | 21 | C7 | 13 | C8 |
SbLTP1.8 | 114 | 90 | 9.10 | 8786.10 | No | 1 | 3 | C1 | 9 | C2 | 14 | C3 | 0 | C4 | 19 | C5 | 1 | C6 | 22 | C7 | 13 | C8 |
SbLTP1.9 | 148 | 116 | 8.51 | 11532.32 | No | 1 | 5 | C1 | 9 | C2 | 21 | C3 | 0 | C4 | 20 | C5 | 1 | C6 | 21 | C7 | 12 | C8 |
Type 2 | ||||||||||||||||||||||
SbLTP2.1 | 99 | 68 | 8.75 | 7053.10 | No | 0 | - | C1 | 7 | C2 | 13 | C3 | 0 | C4 | 8 | C5 | 1 | C6 | 23 | C7 | 6 | C8 |
SbLTP2.2 | 96 | 68 | 6.67 | 7172.18 | No | 0 | - | C1 | 7 | C2 | 13 | C3 | 0 | C4 | 8 | C5 | 1 | C6 | 23 | C7 | 6 | C8 |
SbLTP2.3 | 98 | 74 | 9.22 | 8014.39 | No | 0 | - | C1 | 7 | C2 | 13 | C3 | 0 | C4 | 9 | C5 | 1 | C6 | 23 | C7 | 6 | C8 |
SbLTP2.4 | 98 | 69 | 8.72 | 7143.28 | No | 0 | - | C1 | 7 | C2 | 13 | C3 | 0 | C4 | 8 | C5 | 1 | C6 | 23 | C7 | 6 | C8 |
SbLTP2.5 | 105 | 71 | 9.47 | 7436.83 | No | 0 | - | C1 | 7 | C2 | 13 | C3 | 0 | C4 | 9 | C5 | 1 | C6 | 23 | C7 | 6 | C8 |
SbLTP2.6 | 90 | 65 | 8.71 | 6898.04 | No | 0 | - | C1 | 7 | C2 | 13 | C3 | 0 | C4 | 8 | C5 | 1 | C6 | 21 | C7 | 6 | C8 |
SbLTP2.7 | 92 | 65 | 9.03 | 6999.49 | No | 0 | - | C1 | 7 | C2 | 13 | C3 | 0 | C4 | 8 | C5 | 1 | C6 | 21 | C7 | 6 | C8 |
Type C | ||||||||||||||||||||||
SbLTPc1 | 117 | 75 | 8.52 | 7583.85 | No | 1 | 1 | C1 | 9 | C2 | 19 | C3 | 0 | C4 | 9 | C5 | 1 | C6 | 12 | C7 | 6 | C8 |
SbLTPc2 | 103 | 67 | 5.38 | 6621.62 | No | 1 | 1 | C1 | 9 | C2 | 14 | C3 | 0 | C4 | 9 | C5 | 1 | C6 | 12 | C7 | 6 | C8 |
Type D | ||||||||||||||||||||||
SbLTPd1 | 113 | 84 | 4.08 | 8944.09 | No | 1 | 4 | C1 | 10 | C2 | 16 | C3 | 0 | C4 | 10 | C5 | 1 | C6 | 20 | C7 | 7 | C8 |
SbLTPd2 | 124 | 102 | 4.75 | 10745.21 | No | 1 | 4 | C1 | 10 | C2 | 17 | C3 | 0 | C4 | 9 | C5 | 1 | C6 | 22 | C7 | 9 | C8 |
SbLTPd3 | 112 | 87 | 8.60 | 9714.46 | No | 1 | 4 | C1 | 10 | C2 | 17 | C3 | 0 | C4 | 9 | C5 | 1 | C6 | 11 | C7 | 10 | C8 |
SbLTPd4 | 119 | 91 | 9.65 | 9348.17 | No | 1 | 4 | C1 | 14 | C2 | 14 | C3 | 0 | C4 | 11 | C5 | 1 | C6 | 24 | C7 | 10 | C8 |
SbLTPd5 | 118 | 95 | 8.86 | 9609.17 | No | 1 | 4 | C1 | 14 | C2 | 14 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 24 | C7 | 10 | C8 |
SbLTPd6 | 118 | 92 | 8.19 | 9284.81 | No | 1 | 4 | C1 | 14 | C2 | 14 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 24 | C7 | 10 | C8 |
SbLTPd7 | 108 | 87 | 8.74 | 9866.66 | No | 1 | 4 | C1 | 10 | C2 | 17 | C3 | 0 | C4 | 9 | C5 | 1 | C6 | 11 | C7 | 10 | C8 |
SbLTPd8 | 112 | 91 | 8.21 | 9239.63 | No | 1 | 4 | C1 | 14 | C2 | 14 | C3 | 0 | C4 | 11 | C5 | 1 | C6 | 24 | C7 | 10 | C8 |
SbLTPd9 | 120 | 92 | 8.99 | 9896.69 | No | 1 | 4 | C1 | 10 | C2 | 16 | C3 | 0 | C4 | 9 | C5 | 1 | C6 | 23 | C7 | 9 | C8 |
SbLTPd10 | 199 | 174 | 8.21 | 17752.58 | No | 1 | 4 | C1 | 9 | C2 | 14 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 24 | C7 | 10 | C8 |
SbLTPd11 | 108 | 87 | 8.58 | 9882.61 | No | 1 | 4 | C1 | 10 | C2 | 17 | C3 | 0 | C4 | 9 | C5 | 1 | C6 | 11 | C7 | 10 | C8 |
SbLTPd12 | 103 | 71 | 8.40 | 7757.80 | No | 0 | - | C1 | 2 | C2 | 8 | C3 | 0 | C4 | 9 | C5 | 1 | C6 | 14 | C7 | 7 | C8 |
Type G | ||||||||||||||||||||||
SbLTPg1 | 196 | 166 | 7.65 | 17199.96 | Yes | 2 | - | C1 | 9 | C2 | 16 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 26 | C7 | 8 | C8 |
SbLTPg2 | 187 | 155 | 4.75 | 15151.21 | Yes | 2 | - | C1 | 9 | C2 | 14 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 25 | C7 | 9 | C8 |
SbLTPg3 | 161 | 133 | 6.13 | 12506.98 | Yes | 1 | 4 | C1 | 9 | C2 | 15 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 28 | C7 | 9 | C8 |
SbLTPg4 | 199 | 167 | 5.57 | 16886.45 | Yes | 2 | - | C1 | 10 | C2 | 17 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 24 | C7 | 8 | C8 |
SbLTPg5 | 176 | 152 | 8.19 | 14521.70 | Yes | 2 | - | C1 | 9 | C2 | 16 | C3 | 0 | C4 | 14 | C5 | 1 | C6 | 23 | C7 | 9 | C8 |
SbLTPg6 | 213 | 180 | 8.64 | 17459.99 | Yes | 2 | - | C1 | 9 | C2 | 16 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 24 | C7 | 9 | C8 |
SbLTPg7 | 196 | 169 | 6.87 | 16925.32 | Yes | 2 | - | C1 | 9 | C2 | 14 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 26 | C7 | 9 | C8 |
SbLTPg8 | 217 | 181 | 4.32 | 17669.15 | Yes | 0 | - | C1 | 9 | C2 | 14 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 22 | C7 | 6 | C8 |
SbLTPg9 | 184 | 151 | 8.70 | 14515.45 | Yes | 2 | - | C1 | 9 | C2 | 14 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 26 | C7 | 9 | C8 |
SbLTPg10 | 212 | 183 | 8.54 | 17799.26 | Yes | 1 | 4 | C1 | 9 | C2 | 16 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 24 | C7 | 9 | C8 |
SbLTPg11 | 211 | 181 | 8.47 | 18159.66 | Yes | 2 | - | C1 | 9 | C2 | 16 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 26 | C7 | 8 | C8 |
SbLTPg12 | 168 | 146 | 8.81 | 13945.10 | Yes | 2 | - | C1 | 9 | C2 | 16 | C3 | 0 | C4 | 14 | C5 | 1 | C6 | 22 | C7 | 9 | C8 |
SbLTPg13 | 191 | 164 | 5.54 | 16042.46 | Yes | 2 | - | C1 | 9 | C2 | 16 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 25 | C7 | 9 | C8 |
SbLTPg14 | 181 | 152 | 8.19 | 14685.61 | Yes | 0 | - | C1 | 9 | C2 | 14 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 25 | C7 | 9 | C8 |
SbLTPg15 | 199 | 164 | 3.99 | 16864.06 | Yes | 2 | - | C1 | 9 | C2 | 14 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 26 | C7 | 9 | C8 |
SbLTPg16 | 215 | 188 | 5.02 | 18665.62 | Yes | 2 | - | C1 | 9 | C2 | 21 | C3 | 0 | C4 | 18 | C5 | 1 | C6 | 24 | C7 | 20 | C8 |
SbLTPg17 | 181 | 156 | 6.29 | 16142.26 | Yes | 2 | - | C1 | 9 | C2 | 14 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 29 | C7 | 9 | C8 |
SbLTPg18 | 211 | 179 | 5.11 | 17679.17 | Yes | 2 | - | C1 | 9 | C2 | 16 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 25 | C7 | 9 | C8 |
SbLTPg19 | 153 | 125 | 6.71 | 12766.55 | Yes | 2 | - | C1 | 6 | C2 | 14 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 25 | C7 | 8 | C8 |
SbLTPg20 | 179 | 149 | 8.52 | 14179.07 | Yes | 2 | - | C1 | 6 | C2 | 16 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 25 | C7 | 8 | C8 |
ND | ||||||||||||||||||||||
SbLTPnd1 | 180 | 147 | 4.64 | 14972.17 | No | 2 | - | C1 | 9 | C2 | 14 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 25 | C7 | 9 | C8 |
SbLTPnd2 | 197 | 169 | 8.45 | 16585.12 | No | 1 | 64 | C1 | 9 | C2 | 16 | C3 | 0 | C4 | 13 | C5 | 1 | C6 | 24 | C7 | 9 | C8 |
SbLTPnd3 | 213 | 183 | 4.88 | 19277.18 | No | 2 | C1 | 10 | C2 | 15 | C3 | 0 | C4 | 20 | C5 | 1 | C6 | 26 | C7 | 11 | C8 | |
SbLTPnd4 | 210 | 183 | 5.22 | 19332.2 | No | 1 | 16 | C1 | 10 | C2 | 15 | C3 | 0 | C4 | 20 | C5 | 1 | C6 | 26 | C7 | 11 | C8 |
SbLTPnd5 | 222 | 192 | 4.90 | 20220.40 | No | 1 | 19 | C1 | 10 | C2 | 8 | C3 | 0 | C4 | 17 | C5 | 1 | C6 | 18 | C7 | 7 | C8 |
SbLTPnd6 | 174 | 145 | 4.81 | 15333.92 | No | 2 | C1 | 9 | C2 | 15 | C3 | 0 | C4 | 15 | C5 | 1 | C6 | 26 | C7 | 11 | C8 | |
SbLTPnd7 | 166 | 138 | 5.10 | 14753.43 | No | 2 | C1 | 9 | C2 | 15 | C3 | 0 | C4 | 13 | C5 | 1 | C6 | 26 | C7 | 12 | C8 | |
SbLTPnd8 | 194 | 165 | 4.89 | 17065.76 | No | 2 | C1 | 9 | C2 | 15 | C3 | 0 | C4 | 13 | C5 | 1 | C6 | 26 | C7 | 12 | C8 | |
SbLTPnd9 | 250 | 224 | 4.87 | 22493.45 | No | 1 | 4 | C1 | 9 | C2 | 15 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 26 | C7 | 11 | C8 |
SbLTPnd10 | 173 | 148 | 5.56 | 15390.19 | No | 1 | 6 | C1 | 9 | C2 | 16 | C3 | 0 | C4 | 13 | C5 | 1 | C6 | 26 | C7 | 7 | C8 |
SbLTPnd11 | 155 | 133 | 6.06 | 13811.18 | No | 1 | 4 | C1 | 9 | C2 | 14 | C3 | 0 | C4 | 13 | C5 | 1 | C6 | 26 | C7 | 11 | C8 |
SbLTPnd12 | 106 | 78 | 7.61 | 8180.45 | No | 0 | C1 | 3 | C2 | 12 | C3 | 0 | C4 | 9 | C5 | 1 | C6 | 21 | C7 | 1 | C8 | |
SbLTPnd13 | 120 | 91 | 5.39 | 9554.01 | No | 2 | 227 | C1 | 10 | C2 | 16 | C3 | 0 | C4 | 10 | C5 | 1 | C6 | 17 | C7 | 2 | C8 |
SbLTPnd14 | 126 | 98 | 6.08 | 10592.07 | No | 1 | 1 | C1 | 10 | C2 | 16 | C3 | 0 | C4 | 11 | C5 | 1 | C6 | 23 | C7 | 7 | C8 |
SbLTPnd15 | 104 | 78 | 6.70 | 8170.52 | No | 0 | C1 | 9 | C2 | 16 | C3 | 0 | C4 | 9 | C5 | 1 | C6 | 26 | C7 | 7 | C8 | |
SbLTPnd16 | 105 | 77 | 8.74 | 8030.40 | No | 0 | C1 | 9 | C2 | 16 | C3 | 0 | C4 | 9 | C5 | 1 | C6 | 24 | C7 | 7 | C8 | |
SbLTPnd17 | 177 | 151 | 7.81 | 16470.09 | No | 1 | 28 | C1 | 6 | C2 | 13 | C3 | 0 | C4 | 12 | C5 | 1 | C6 | 25 | C7 | 5 | C8 |
SbLTPnd18 | 125 | 76 | 4.72 | 8028.27 | No | 0 | C1 | 9 | C2 | 17 | C3 | 0 | C4 | 9 | C5 | 1 | C6 | 24 | C7 | 7 | C8 | |