Fig. 6 | Scientific Reports

Fig. 6

From: Novel single-cell preservation and RNA sequencing technology unlocks field studies for Plasmodium natural infections

Fig. 6

Life stage annotation of HIVE scRNA-seq dataset and life stage composition (A) 2D UMAP of the HIVE scRNA-seq dataset (22,345 cells) with the life stage annotation. Cells were assigned to ring (early/late), trophozoite (early/mid/late), and schizont (early/mid/late) life stages, using scmap and the P. knowlesi reference dataset. Only 2 cells could not be assigned a life stage (NA). (B) 2D UMAPs showing the life stage annotation per sample. (C) Life stage composition recovered per sample as a percentage of the total number of cells recovered per method.

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