Table 2 Characterization of IIS6 and IIIS6 segment haplotypes in the NaV gene of Aedes albopictus populations from Brazil.
From: High voltage-gated sodium channel gene diversity in Aedes albopictus across Brazil
Haplotype | Submission ID | GenBank accession ID | NaV segment | Sequence length (bp) | Total frequence/ NaV segment | Number of used reads | Number of populations where found |
|---|---|---|---|---|---|---|---|
2s6.00 | BankIt2831600 | PP842849 | IIS6 | 314 | 0,36 | 580.564 | 37 |
2s6.01 | BankIt2831600 | PP842850 | IIS6 | 331 | 0,10 | 145.155 | 32 |
2s6.02 | BankIt2831600 | PP842851 | IIS6 | 334 | 0,20 | 355.901 | 25 |
2s6.03 | BankIt2831600 | PP842852 | IIS6 | 325 | 0,08 | 134.723 | 17 |
2s6.04 | BankIt2831600 | PP842853 | IIS6 | 326 | 0,05 | 66.466 | 17 |
2s6.05 | BankIt2831600 | PP842854 | IIS6 | 334 | 0,04 | 66.494 | 13 |
2s6.06 | BankIt2831600 | PP842855 | IIS6 | 331 | 0,03 | 48.794 | 11 |
2s6.07 | BankIt2831600 | PP842856 | IIS6 | 333 | 0,01 | 18.372 | 11 |
2s6.08 | BankIt2831600 | PP842857 | IIS6 | 334 | 0,03 | 30.845 | 7 |
2s6.09 | BankIt2831600 | PP842858 | IIS6 | 334 | 0,01 | 12.118 | 7 |
2s6.10 | BankIt2831600 | PP842859 | IIS6 | 331 | 0,02 | 26.102 | 6 |
2s6.11 | BankIt2831600 | PP842860 | IIS6 | 325 | 0,01 | 24.935 | 5 |
2s6.12 | BankIt2831600 | PP842861 | IIS6 | 334 | 0,01 | 8.857 | 5 |
2s6.13 | BankIt2831600 | PP842862 | IIS6 | 325 | 0,02 | 29.951 | 4 |
2s6.14 | BankIt2831600 | PP842863 | IIS6 | 317 | 0,01 | 24.705 | 3 |
2s6.15 | BankIt2831600 | PP842864 | IIS6 | 332 | 0,01 | 19.311 | 3 |
2s6.16 | BankIt2831600 | PP842865 | IIS6 | 314 | 0,01 | 20.223 | 3 |
2s6.17 | BankIt2831600 | PP842866 | IIS6 | 326 | 0,00 | 4.695 | 3 |
2s6.18 | BankIt2831600 | PP842867 | IIS6 | 330 | 0,01 | 15.973 | 2 |
2s6.19 | BankIt2831600 | PP842868 | IIS6 | 328 | 0,00 | 8.057 | 2 |
3s6.00 | BankIt2795736 | PP737830 | IIIS6 | 415 | 0,68 | 626.082 | 44 |
3s6.01 | BankIt2795736 | PP737829 | IIIS6 | 416 | 0,10 | 91.610 | 31 |
3s6.02 | BankIt2795736 | PP737828 | IIIS6 | 431 | 0,05 | 42.791 | 29 |
3s6.03 | BankIt2795736 | PP737827 | IIIS6 | 415 | 0,06 | 47.730 | 20 |
3s6.04 | BankIt2795736 | PP737826 | IIIS6 | 430 | 0,02 | 13.915 | 11 |
3s6.05 | BankIt2795736 | PP737825 | IIIS6 | 433 | 0,02 | 15.748 | 10 |
3s6.06 | BankIt2795736 | PP737824 | IIIS6 | 430 | 0,03 | 26.081 | 9 |
3s6.07 | BankIt2795736 | PP737823 | IIIS6 | 417 | 0,01 | 8.490 | 6 |
3s6.08 | BankIt2795736 | PP737822 | IIIS6 | 431 | 0,01 | 4.523 | 6 |
3s6.09 | BankIt2795736 | PP737821 | IIIS6 | 431 | 0,01 | 3.362 | 5 |
3s6.10 | BankIt2795736 | PP737820 | IIIS6 | 416 | 0,00 | 4.490 | 5 |
3s6.11 | BankIt2795736 | PP737819 | IIIS6 | 415 | 0,00 | 2.860 | 5 |
3s6.12 | BankIt2795736 | PP737818 | IIIS6 | 433 | 0,00 | 2.810 | 4 |
3s6.13 | BankIt2795736 | PP737817 | IIIS6 | 415 | 0,00 | 2.353 | 4 |
3s6.14 | BankIt2795736 | PP737816 | IIIS6 | 428 | 0,00 | 4.169 | 3 |
3s6.15 | BankIt2795736 | PP737815 | IIIS6 | 431 | 0,00 | 2.297 | 3 |
3s6.16 | BankIt2795736 | PP737814 | IIIS6 | 422 | 0,00 | 1.969 | 3 |
3s6.17 | BankIt2795736 | PP737813 | IIIS6 | 416 | 0,00 | 1.927 | 3 |
3s6.18 | BankIt2795736 | PP737812 | IIIS6 | 418 | 0,00 | 1.200 | 3 |
3s6.19 | BankIt2795736 | PP737811 | IIIS6 | 416 | 0,00 | 3.078 | 2 |
3s6.20 | BankIt2795736 | PP737810 | IIIS6 | 418 | 0,00 | 2.286 | 2 |
3s6.21 | BankIt2795736 | PP737809 | IIIS6 | 415 | 0,00 | 1.852 | 2 |
3s6.22 | BankIt2795736 | PP737808 | IIIS6 | 431 | 0,00 | 2.042 | 2 |
3s6.23 | BankIt2795736 | PP737807 | IIIS6 | 431 | 0,00 | 1.068 | 2 |
