Table 2 List of predicted novel miRNAs from B. tabaci whole genome.
provisional id | P value | Rfam alert | Total count | Mature count | miRBase family | Mature sequences | Star sequences | Precursor sequences | Precursor coordinate |
|---|---|---|---|---|---|---|---|---|---|
btab-miR-673-5p-novel-a | 0.99 | Â | 215 | 213 | mir-673-5p | aucacagccagcuuugaugagc | ucacaaaguggcugucaugug | ucacaaaguggcugucaugugucucuuugccaucauaucacagccagcuuugaugagc | OU963871.1:1752774..1752832:+ |
btab-miR-novel-1 | 0.99 | – | 54 | 41 | – | aggaacuucauaccgugcucu | gcgagguauagaguuccuacg | gcgagguauagaguuccuacgugauuuuauuuuauuguaggaacuucauaccgugcucu | OU963862.1:11437112..11437171:+ |
btab-miR-5252-novel | 0.99 | – | 45 | 19 | mir5252 | agagagcuauccuucgacagu | gucauggaguugcucucuuugu | agagagcuauccuucgacaguauaauuuuuguaccacugucauggaguugcucucuuugu | OU963863.1:55983119..55983179:+ |
btab-miR-196-novel | 0.99 | – | 43 | 39 | mir-196a-5p | gagguaguagguuguauagu | uguacagcuugcuaacuuucc | gagguaguagguuguauaguaaaguacuacaucuuuuuuggcguacuguacagcuugcuaacuuucc | OU963867.1:28558329..28558396:+ |
btab-miR-novel-2 | 0.99 | – | 46 | 26 | – | cguauacuaaauguauccuga | gguauaccuuuaguauacguaac | cguauacuaaauguauccugaguguuauauucuuccgguauaccuuuaguauacguaac | OU963869.1:6034285..6034344:+ |
btab-miR-754-novel | 0.99 | – | 44 | 43 | mir-754a | auugcuugagaauacacguag | cgcguauucuuggggaauuaac | cgcguauucuuggggaauuaacacacuuugcagcuguuauugcuugagaauacacguag | OU963871.1:31137998..31138057:+ |
btab-miR-743-novel | 0.99 | – | 29 | 23 | mir-743a-3p | gaaagacauggguagugagaug | cucacuaccuugucuuucaug | gaaagacauggguagugagaugugucgauaauuuugucucacuaccuugucuuucaug | OU963871.1:1748997..1749055:+ |
btab-miR-200-novel | 0.99 | – | 22 | 18 | mir-200b-5p | aucuuacugggcagcauugga | aauacugucagguaaugaugu | aucuuacugggcagcauuggagcgaaauuaacuucucuaauacugucagguaaugaugu | OU963864.1:17628502..17628561:+ |
btab-miR-novel-3 | 0.96 | – | 10 | 9 | – | uaggccggcggaaacuacuugc | gggguuucauucggccuccag | gggguuucauucggccuccagccuaauugagauguuguaggccggcggaaacuacuugc | OU963871.1:19458886..19458945:+ |
btab-miR-4958-novel | 0.96 | – | 29 | 29 | mir-4958-3p | cagguaccugaaguagcgcgcg | cgggcuacaucagggacuuagcgac | cgggcuacaucagggacuuagcgacuguguuauuuuacagucagguaccugaaguagcgcgcg | OU963870.1:38235292..38235355:+ |
btab-miR-673-novel-b | 0.96 | – | 211 | 211 | mir-673-5p | aucacagccagcuuugaugagc | ccgucaaagcaggccuguuauag | ccgucaaagcaggccuguuauagggcacuuugcacgucuaucacagccagcuuugaugagc | OU963871.1:1749133..1749194:+ |
btab-miR-263-novel-b | 0.96 | – | 16 | 16 | mir-263b | auggcacuagaagaauucacggg | cgugggucuucagugucaucu | auggcacuagaagaauucacggguuuauucgucucucgugggucuucagugucaucu | OU963863.1:57483187..57483244:+ |
btab-miR-3338-novel | 0.96 | – | 26 | 26 | mir-3338-3p | uuguacuucaucaggugcucug | ggcauccguuggagugcaagc | uuguacuucaucaggugcucuggucuauuuguuuccaggcauccguuggagugcaagc | OU963870.1:38237063..38237121:+ |
btab-miR-92a-novel-a | 0.96 | – | 16 | 16 | mir-92a | auugcacuugucccggccua | gucugugaugggugcaaaau | gucugugaugggugcaaaauccguugucgucagauauugcacuugucccggccua | OU963867.1:12399303..12399358:+ |
btab-miR-31-5p-novel | 0.96 | – | 56 | 56 | mir-31-5p | ggcaagauguuggcauagcug | ggugugucacaucuggccaa | ggcaagauguuggcauagcugacgugcaauugauagcucaggugugucacaucuggccaa | OU963862.1:7850054..7850114:+ |
btab-miR-2651-novel | 0.96 | – | 28 | 28 | mir2651 | uuugauuguugcucagaaagc | uuucuagcaguaaucaagac | uuugauuguugcucagaaagccguguuuuucauaaggcuuucuagcaguaaucaagac | OU963869.1:30838670..30838728:+ |
btab-miR-4324-novel | 0.96 | – | 88 | 88 | mir-4324 | cccugagacccuaauuuguga | acagauuaggcaucucagguac | cccugagacccuaauuugugauuucuguucauguagcucacagauuaggcaucucagguac | OU963867.1:28584628..28584689:+ |
btab-miR-263-novel-b | 0.96 | – | 19 | 19 | mir-263b | auggcacuggaagaauucacggg | caugaauucucagugucaucu | auggcacuggaagaauucacggguuuuuuuccucaugaauucucagugucaucu | CAKKNF020000013.1:35422..35476:+ |
btab-miR-263-novel-b | 0.96 | – | 19 | 19 | mir-263b | auggcacuggaagaauucacggg | caugaauucucagugucaucu | auggcacuggaagaauucacggguuuuuuuccucaugaauucucagugucaucu | CAKKNF020000012.1:253444..253498:- |
btab-miR-673-5p-novel-b | 0.96 | – | 213 | 213 | mir-673-5p | aucacagccagcuuugaugagc | ucgucaaggugucugugaaaugu | ucgucaaggugucugugaaauguguuuuugaucauaucacagccagcuuugaugagc | OU963871.1:1752940..1752997:+ |
btab-miR-263-novel-b | 0.96 | – | 30 | 30 | mir-263b | uuggcacuggaagaauucac | ggaucuuuuggugccaaac | uuggcacuggaagaauucacagacuguuauuaaagaucguggaucuuuuggugccaaac | OU963863.1:57526474..57526533:+ |
btab-miR-3622a-5p-novel | 0.96 | – | 101 | 101 | mir-3622a-5p | aaggcacgcggugaaugcca | guguucacuguguuggcuuaaugu | guguucacuguguuggcuuaaugugauuuuaucauaaggcacgcggugaaugcca | OU963862.1:86510590..86510645:+ |
btb-miR-92a-novel-b | 0.96 | – | 23 | 23 | mir-92a | auugcacuagucccggccugc | aggucgagucuagggcaaauuuu | aggucgagucuagggcaaauuuugugcucuuucaaauugcacuagucccggccugc | OU963867.1:12399466..12399522:+ |
btab-miR-1451-3p-novel | 0.89 | – | 9 | 9 | mir-1451-3p | gguaacuccaccaccguuggc | cugcggugucggaguucccgc | gguaacuccaccaccguuggcuuuuauuuuuugccugcggugucggaguucccgc | OU963866.1:45460163..45460218:+ |
btab-miR-10-3p-novel | 0.89 | – | 10 | 10 | mir-10-3p | aaauucgguucuagagagguuu | acccuguagauccgaaauuugu | acccuguagauccgaaauuugucuuuagaaauucgacaaauucgguucuagagagguuu | OU963869.1:29904,287..29904346:+ |
btab-miR-3468-3p-novel | 0.83 | – | 7 | 7 | mir3468-3p | gucuuuucccgcuuugcugccg | acagcaaagugaaaaaggccg | gucuuuucccgcuuugcugccgcguuuuuugaagcgacagcaaagugaaaaaggccg | OU963863.1:47378184..47378241:+ |
btab-miR-novel-4 | 0.78 | – | 3 | 1 | – | cacacccagauugagugagu | cacucaaggagguugugaugg | cacucaaggagguugugauggaucguagguaaacacaucacacccagauugagugagu | OU963869.1:43168939..43168997:+ |
btab-miR-novel-5 | 0.78 | – | 27 | 27 | – | cagucuuuuucucucuccua | ggagagagaggaaggcuuuugac | ggagagagaggaaggcuuuugacuuguuuuuaucucucagucagucuuuuucucucuccua | OU963866.1:52159919..52159980:+ |
btab-miR-novel-6 | 0.78 | – | 58 | 58 | – | ggacggagaacugauaagggc | ccuuaucauucuuuggcccag | ccuuaucauucuuuggcccagugauuauuuuauacagcuggacggagaacugauaagggc | OU963862.1:77933357..77933417:+ |
btab-miR-novel-7 | 0.74 | – | 95 | 95 | – | cuuugguuaccuagcuguauga | auaaaguuaggcgaccgaaguu | cuuugguuaccuagcuguaugagugugauucagauuucauaaaguuaggcgaccgaaguu | OU963869.1:36794321..36794381:+ |
btab-miR-novel-8 | 0.74 | – | 16 | 16 | – | aagcguauagcuuuuccccuu | cgggggaaguuauaucgcagau | cgggggaaguuauaucgcagauguucugcuuaucauaagcguauagcuuuuccccuu | OU963862.1:44871406..44871463:+ |
btab-miR-novel-10 | 0.74 | – | 77 | 77 | – | gauuguccaaacgcaauucuug | aggguugaguaaggacaucaa | gauuguccaaacgcaauucuuguugauaauugaucaaggguugaguaaggacaucaa | OU963864.1:55740518..55740575:+ |
btab-miR-5022-novel | 0.74 | – | 2 | 2 | mir-5022 | cucaugggcucccauggg | cauggggacccaucggaa | cauggggacccaucggaaucucauggagacccauuggaaucucauggggacccauuggaaucucaugggcucccauggg | OU963865.1:52146278..52146357:+ |