Table 2 List of predicted novel miRNAs from B. tabaci whole genome.

From: Genomic exploration of Bemisia tabaci microRNAs using predictive modeling and confirmation through experimental evidence

provisional id

P value

Rfam alert

Total count

Mature count

miRBase family

Mature sequences

Star sequences

Precursor sequences

Precursor coordinate

btab-miR-673-5p-novel-a

0.99

 

215

213

mir-673-5p

aucacagccagcuuugaugagc

ucacaaaguggcugucaugug

ucacaaaguggcugucaugugucucuuugccaucauaucacagccagcuuugaugagc

OU963871.1:1752774..1752832:+

btab-miR-novel-1

0.99

–

54

41

–

aggaacuucauaccgugcucu

gcgagguauagaguuccuacg

gcgagguauagaguuccuacgugauuuuauuuuauuguaggaacuucauaccgugcucu

OU963862.1:11437112..11437171:+

btab-miR-5252-novel

0.99

–

45

19

mir5252

agagagcuauccuucgacagu

gucauggaguugcucucuuugu

agagagcuauccuucgacaguauaauuuuuguaccacugucauggaguugcucucuuugu

OU963863.1:55983119..55983179:+

btab-miR-196-novel

0.99

–

43

39

mir-196a-5p

gagguaguagguuguauagu

uguacagcuugcuaacuuucc

gagguaguagguuguauaguaaaguacuacaucuuuuuuggcguacuguacagcuugcuaacuuucc

OU963867.1:28558329..28558396:+

btab-miR-novel-2

0.99

–

46

26

–

cguauacuaaauguauccuga

gguauaccuuuaguauacguaac

cguauacuaaauguauccugaguguuauauucuuccgguauaccuuuaguauacguaac

OU963869.1:6034285..6034344:+

btab-miR-754-novel

0.99

–

44

43

mir-754a

auugcuugagaauacacguag

cgcguauucuuggggaauuaac

cgcguauucuuggggaauuaacacacuuugcagcuguuauugcuugagaauacacguag

OU963871.1:31137998..31138057:+

btab-miR-743-novel

0.99

–

29

23

mir-743a-3p

gaaagacauggguagugagaug

cucacuaccuugucuuucaug

gaaagacauggguagugagaugugucgauaauuuugucucacuaccuugucuuucaug

OU963871.1:1748997..1749055:+

btab-miR-200-novel

0.99

–

22

18

mir-200b-5p

aucuuacugggcagcauugga

aauacugucagguaaugaugu

aucuuacugggcagcauuggagcgaaauuaacuucucuaauacugucagguaaugaugu

OU963864.1:17628502..17628561:+

btab-miR-novel-3

0.96

–

10

9

–

uaggccggcggaaacuacuugc

gggguuucauucggccuccag

gggguuucauucggccuccagccuaauugagauguuguaggccggcggaaacuacuugc

OU963871.1:19458886..19458945:+

btab-miR-4958-novel

0.96

–

29

29

mir-4958-3p

cagguaccugaaguagcgcgcg

cgggcuacaucagggacuuagcgac

cgggcuacaucagggacuuagcgacuguguuauuuuacagucagguaccugaaguagcgcgcg

OU963870.1:38235292..38235355:+

btab-miR-673-novel-b

0.96

–

211

211

mir-673-5p

aucacagccagcuuugaugagc

ccgucaaagcaggccuguuauag

ccgucaaagcaggccuguuauagggcacuuugcacgucuaucacagccagcuuugaugagc

OU963871.1:1749133..1749194:+

btab-miR-263-novel-b

0.96

–

16

16

mir-263b

auggcacuagaagaauucacggg

cgugggucuucagugucaucu

auggcacuagaagaauucacggguuuauucgucucucgugggucuucagugucaucu

OU963863.1:57483187..57483244:+

btab-miR-3338-novel

0.96

–

26

26

mir-3338-3p

uuguacuucaucaggugcucug

ggcauccguuggagugcaagc

uuguacuucaucaggugcucuggucuauuuguuuccaggcauccguuggagugcaagc

OU963870.1:38237063..38237121:+

btab-miR-92a-novel-a

0.96

–

16

16

mir-92a

auugcacuugucccggccua

gucugugaugggugcaaaau

gucugugaugggugcaaaauccguugucgucagauauugcacuugucccggccua

OU963867.1:12399303..12399358:+

btab-miR-31-5p-novel

0.96

–

56

56

mir-31-5p

ggcaagauguuggcauagcug

ggugugucacaucuggccaa

ggcaagauguuggcauagcugacgugcaauugauagcucaggugugucacaucuggccaa

OU963862.1:7850054..7850114:+

btab-miR-2651-novel

0.96

–

28

28

mir2651

uuugauuguugcucagaaagc

uuucuagcaguaaucaagac

uuugauuguugcucagaaagccguguuuuucauaaggcuuucuagcaguaaucaagac

OU963869.1:30838670..30838728:+

btab-miR-4324-novel

0.96

–

88

88

mir-4324

cccugagacccuaauuuguga

acagauuaggcaucucagguac

cccugagacccuaauuugugauuucuguucauguagcucacagauuaggcaucucagguac

OU963867.1:28584628..28584689:+

btab-miR-263-novel-b

0.96

–

19

19

mir-263b

auggcacuggaagaauucacggg

caugaauucucagugucaucu

auggcacuggaagaauucacggguuuuuuuccucaugaauucucagugucaucu

CAKKNF020000013.1:35422..35476:+

btab-miR-263-novel-b

0.96

–

19

19

mir-263b

auggcacuggaagaauucacggg

caugaauucucagugucaucu

auggcacuggaagaauucacggguuuuuuuccucaugaauucucagugucaucu

CAKKNF020000012.1:253444..253498:-

btab-miR-673-5p-novel-b

0.96

–

213

213

mir-673-5p

aucacagccagcuuugaugagc

ucgucaaggugucugugaaaugu

ucgucaaggugucugugaaauguguuuuugaucauaucacagccagcuuugaugagc

OU963871.1:1752940..1752997:+

btab-miR-263-novel-b

0.96

–

30

30

mir-263b

uuggcacuggaagaauucac

ggaucuuuuggugccaaac

uuggcacuggaagaauucacagacuguuauuaaagaucguggaucuuuuggugccaaac

OU963863.1:57526474..57526533:+

btab-miR-3622a-5p-novel

0.96

–

101

101

mir-3622a-5p

aaggcacgcggugaaugcca

guguucacuguguuggcuuaaugu

guguucacuguguuggcuuaaugugauuuuaucauaaggcacgcggugaaugcca

OU963862.1:86510590..86510645:+

btb-miR-92a-novel-b

0.96

–

23

23

mir-92a

auugcacuagucccggccugc

aggucgagucuagggcaaauuuu

aggucgagucuagggcaaauuuugugcucuuucaaauugcacuagucccggccugc

OU963867.1:12399466..12399522:+

btab-miR-1451-3p-novel

0.89

–

9

9

mir-1451-3p

gguaacuccaccaccguuggc

cugcggugucggaguucccgc

gguaacuccaccaccguuggcuuuuauuuuuugccugcggugucggaguucccgc

OU963866.1:45460163..45460218:+

btab-miR-10-3p-novel

0.89

–

10

10

mir-10-3p

aaauucgguucuagagagguuu

acccuguagauccgaaauuugu

acccuguagauccgaaauuugucuuuagaaauucgacaaauucgguucuagagagguuu

OU963869.1:29904,287..29904346:+

btab-miR-3468-3p-novel

0.83

–

7

7

mir3468-3p

gucuuuucccgcuuugcugccg

acagcaaagugaaaaaggccg

gucuuuucccgcuuugcugccgcguuuuuugaagcgacagcaaagugaaaaaggccg

OU963863.1:47378184..47378241:+

btab-miR-novel-4

0.78

–

3

1

–

cacacccagauugagugagu

cacucaaggagguugugaugg

cacucaaggagguugugauggaucguagguaaacacaucacacccagauugagugagu

OU963869.1:43168939..43168997:+

btab-miR-novel-5

0.78

–

27

27

–

cagucuuuuucucucuccua

ggagagagaggaaggcuuuugac

ggagagagaggaaggcuuuugacuuguuuuuaucucucagucagucuuuuucucucuccua

OU963866.1:52159919..52159980:+

btab-miR-novel-6

0.78

–

58

58

–

ggacggagaacugauaagggc

ccuuaucauucuuuggcccag

ccuuaucauucuuuggcccagugauuauuuuauacagcuggacggagaacugauaagggc

OU963862.1:77933357..77933417:+

btab-miR-novel-7

0.74

–

95

95

–

cuuugguuaccuagcuguauga

auaaaguuaggcgaccgaaguu

cuuugguuaccuagcuguaugagugugauucagauuucauaaaguuaggcgaccgaaguu

OU963869.1:36794321..36794381:+

btab-miR-novel-8

0.74

–

16

16

–

aagcguauagcuuuuccccuu

cgggggaaguuauaucgcagau

cgggggaaguuauaucgcagauguucugcuuaucauaagcguauagcuuuuccccuu

OU963862.1:44871406..44871463:+

btab-miR-novel-10

0.74

–

77

77

–

gauuguccaaacgcaauucuug

aggguugaguaaggacaucaa

gauuguccaaacgcaauucuuguugauaauugaucaaggguugaguaaggacaucaa

OU963864.1:55740518..55740575:+

btab-miR-5022-novel

0.74

–

2

2

mir-5022

cucaugggcucccauggg

cauggggacccaucggaa

cauggggacccaucggaaucucauggagacccauuggaaucucauggggacccauuggaaucucaugggcucccauggg

OU963865.1:52146278..52146357:+