Table 2 The primer sequences of genes for RT-qPCR

From: Astaxanthin-rich Nannochloropsis oculata mitigates high-fat diet-induced liver dysfunction in zebrafish by modulating lipid metabolism and oxidative stress

Gene

Primers sequences and directions (5’-3’)

Tm (℃)

Product

size (bp)

GenBank accession no.

Primer efficiency (%)

Il-1β

GAACTTAACCAGCTCTGAAATGATG

CATGTCGCATCTGTAGCTCATTG

58

103

BC098597.1

100

Il-8

TGTTTTCCTGGCATTTCTGACC

TTTACAGTGTGGGCTTGGAGGG

58

118

ZDB-GENE 081104-317

98

Il-10

TCACGTCATGAACGAGATCC

CCTCTTGCATTTCACCATATC C

57

149

BC163031.1

100

Tgf-α

GGATGTTGAAGAAGGAGAG TTG

TATGGAGCGTGAAGCAGAC

59

185

AY427649.1

100

Tgf-β

TGGCTCGATTTCTCAGTCGG

CCCTCTGCTTCAGTCCATCTC

58

211

AY178450.1

99

Reference genes

Gapdh

CAGTCGCTGATGTGTCCGTTGTC

GAGACGAACGCAGCGTCTCGTAG

59

416

NM_213094

100

β act

GTATTGCTGACCGTATGC

CTGCCTCATCGTATTCCT

58

139

NM_131031.2

99

  1. IL1β, Interleukin-1 beta; IL-8, Interleukin-8; IL-10, Interleukin-10; TGFα, Transforming growth factor alpha; TGFβ, Transforming growth factor beta; GAPDH, glyceraldehyde 3-phosphate dehydrogenase; β ACT, Beta actin