Table 4 Results of GSVA for GSE135917.

From: Polygenic insight identifies precision biomarkers decoding protein catabolism and autophagy pathways in obstructive sleep apnea

Pathway

logFC

AveExpr

t

P.Value

adj.P.Val

B

BIOCARTA RAB PATHWAY

1.079768

0.066141

5.949468

1.15E − 07

0.00034

7.42047

WP GLYCOLYSIS IN SENESCENCE

1.06765

0.02067

5.040783

3.90E − 06

0.001433

4.179241

WP INHIBITION OF EXOSOME BIOGENESIS AND SECRETION BY MANUMYCIN A IN CRPC CELLS

0.974077

0.052636

5.049403

3.77E − 06

0.001433

4.209079

KEGG MEDICUS PATHOGEN ESCHERICHIA MAP TO CDC42 SIGNALING PATHWAY

0.973228

0.058677

5.205807

2.09E − 06

0.001281

4.753916

REACTOME FORMATION OF APOPTOSOME

0.965004

0.035656

4.895371

6.71E − 06

0.0015

3.679145

KEGG MEDICUS VARIANT MUTATION CAUSED ABERRANT SNCA TO 26 S PROTEASOME MEDIATED PROTEIN DEGRADATION

0.964754

0.047436

4.88058

7.09E − 06

0.0015

3.628623

KEGG MEDICUS PATHOGEN ESCHERICHIA ESPT TO RAC SIGNALING PATHWAY

0.953805

0.048337

5.165818

2.43E − 06

0.001281

4.613998

KEGG MEDICUS VARIANT SCRAPIE CONFORMATION PRPSC TO 26 S PROTEASOME MEDIATED PROTEIN DEGRADATION

0.944379

0.041572

4.767574

1.08E − 05

0.001538

3.244876

KEGG MEDICUS VARIANT MUTATION CAUSED ABERRANT ABETA TO 26 S PROTEASOME MEDIATED PROTEIN DEGRADATION

0.940035

0.04027

4.786796

1.00E − 05

0.001538

3.309867

REACTOME CYTOCHROME C MEDIATED APOPTOTIC RESPONSE

0.933837

0.032691

4.876091

7.21E − 06

0.0015

3.613305

WP AEROBIC GLYCOLYSIS

0.929722

0.051353

4.42009

3.79E − 05

0.001631

2.091638

KEGG MEDICUS VARIANT MUTATION CAUSED ABERRANT ABETA TO VGCC CA2 APOPTOTIC PATHWAY N01006

0.919694

0.038965

4.305127

5.70E − 05

0.001738

1.719822

KEGG MEDICUS REFERENCE COPII VESICLE FORMATION

0.915206

0.041616

4.498387

2.87E − 05

0.001538

2.347748

KEGG MEDICUS PATHOGEN HCMV GB TO PDGFR RAS ERK SIGNALING PATHWAY

0.908566

0.053111

4.675744

1.51E − 05

0.001538

2.936054

BIOCARTA PROTEASOME PATHWAY

0.903748

0.017614

4.393685

4.17E − 05

0.001643

2.005787

WP GLUTATHIONE METABOLISM

0.886324

0.057854

4.551209

2.37E − 05

0.001538

2.521802

KEGG MEDICUS PATHOGEN SHIGELLA IPAC TO ACTIN SIGNALING PATHWAY

0.884306

0.03061

4.6392

1.72E − 05

0.001538

2.81394

KEGG MEDICUS REFERENCE BETA OXIDATION

0.882811

0.057356

4.028536

0.000148

0.002283

0.847335

REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC

0.876905

0.02016

4.631794

1.77E − 05

0.001538

2.789247

KEGG MEDICUS REFERENCE EGF EGFR RAS RALGDS SIGNALING PATHWAY

0.875816

0.040582

5.146512

2.61E − 06

0.001281

4.546597

  1. GSVA Gene Set Variation Analysis.