Table 6 Results of GSVA for risk groups.
Pathway | logFC | AveExpr | t | P.Value | adj.P.Val | B |
|---|---|---|---|---|---|---|
REACTOME CRISTAE FORMATION | 1.471968 | 0.015666 | 11.69313 | 1.30E − 15 | 3.81E − 12 | 25.19441 |
REACTOME INHIBITION OF REPLICATION INITIATION OF DAMAGED DNA BY RB1 E2F1 | 1.334985 | 0.03068 | 9.998795 | 2.72E − 13 | 4.00E − 10 | 20.06288 |
REACTOME MASTL FACILITATES MITOTIC PROGRESSION | 1.295186 | − 0.03711 | 8.783679 | 1.56E − 11 | 7.63E − 09 | 16.15048 |
REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC | 1.268389 | 0.003516 | 9.385102 | 2.05E − 12 | 2.02E − 09 | 18.10924 |
REACTOME FORMATION OF APOPTOSOME | 1.230863 | 0.07582 | 6.873592 | 1.18E − 08 | 4.09E − 07 | 9.714707 |
REACTOME CYTOCHROME C MEDIATED APOPTOTIC RESPONSE | 1.2014 | 0.063149 | 7.197628 | 3.78E − 09 | 2.37E − 07 | 10.82135 |
REACTOME AUF1 HNRNP D0 BINDS AND DESTABILIZES MRNA | 1.19906 | 0.037314 | 8.503524 | 4.05E − 11 | 1.32E − 08 | 15.22453 |
REACTOME CITRIC ACID CYCLE TCA CYCLE | 1.194209 | 0.033752 | 7.549376 | 1.10E − 09 | 9.99E − 08 | 12.01842 |
KEGG MEDICUS REFERENCE COPII VESICLE FORMATION | 1.187721 | 0.006464 | 6.742208 | 1.88E − 08 | 5.58E − 07 | 9.265489 |
WP TCA CYCLE AKA KREBS OR CITRIC ACID CYCLE | 1.186349 | 0.033107 | 7.018335 | 7.10E − 09 | 2.97E − 07 | 10.20934 |
BIOCARTA EIF PATHWAY | 1.185903 | 0.022711 | 7.516572 | 1.24E − 09 | 9.99E − 08 | 11.90704 |
WP INHIBITION OF EXOSOME BIOGENESIS AND SECRETION BY MANUMYCIN A IN CRPC CELLS | 1.178824 | 0.070092 | 6.897002 | 1.09E − 08 | 3.91E − 07 | 9.794729 |
WP TGF SMAD SIGNALING PATHWAY | 1.166361 | 0.042474 | 6.994659 | 7.72E − 09 | 3.01E − 07 | 10.12846 |
KEGG MEDICUS REFERENCE ISOLEUCINE DEGRADATION | 1.15542 | 0.078808 | 5.736346 | 6.43E − 07 | 7.48E − 06 | 5.839578 |
KEGG MEDICUS VARIANT MUTATION CAUSED ABERRANT ABETA TO 26 S PROTEASOME MEDIATED PROTEIN DEGRADATION | 1.154583 | 0.035962 | 7.028966 | 6.84E − 09 | 2.97E − 07 | 10.24566 |
KEGG MEDICUS VARIANT MUTATION CAUSED ABERRANT SOD1 TO 26 S PROTEASOME MEDIATED PROTEIN DEGRADATION | 1.150939 | 0.034851 | 7.132982 | 4.74E − 09 | 2.63E − 07 | 10.6008 |
KEGG MEDICUS VARIANT SCRAPIE CONFORMATION PRPSC TO 26 S PROTEASOME MEDIATED PROTEIN DEGRADATION | 1.149245 | 0.034733 | 6.954073 | 8.90E − 09 | 3.36E − 07 | 9.989785 |
WP PROTEASOME DEGRADATION | 1.146715 | 0.002829 | 8.56755 | 3.25E − 11 | 1.19E − 08 | 15.43685 |
WP TCA CYCLE AND DEFICIENCY OF PYRUVATE DEHYDROGENASE COMPLEX PDHC | 1.142976 | 0.047393 | 6.020713 | 2.38E − 07 | 3.55E − 06 | 6.80301 |
REACTOME PLATELET SENSITIZATION BY LDL | 1.13461 | 0.023269 | 8.991071 | 7.71E − 12 | 4.83E − 09 | 16.83058 |