Table 3 The percentage of missing values in smokers and nonsmokers.
From: Exposure-inducible genes may contribute to missingness in RNAseq-based gene expression analyses
RNA type | Adjacent normal | Tumor | ||||
|---|---|---|---|---|---|---|
Nonsmokers | Smokers | Comparison | Nonsmokers | Smokers | Comparison | |
All | 37.04+-0.17 | 38.53+-0.17 | t = 2.49, P = 0.01 | 35.93+-0.17 | 36.53+-0.17 | t = 6.19, P = 6.2 × 10-10 |
Protein coding | 12.08+-0.18 | 13.21+-0.18 | t = 2.51, P = 0.01 | 12.78+-0.18 | 13.32+-0.18 | t = 2.37, P = 0.02 |
lncRNA | 43.69+-0.29 | 44.84+-0.28 | t = 2.82, P = 0.005 | 45.44+-0.29 | 47.41+-0.28 | t = 4.87, P = 1.12 × 10-6 |
Processed pseudogene | 59.11+-0.39 | 60.15+-0.36 | t = 1.98, P = 0.04 | 60.38+-0.39 | 63.62+-0.29 | t = 2.34, P = 1.12 × 10-5 |
Unprocessed pseudogene | 71.04+-0.75 | 72.11+-0.68 | t = 1.706 P = 0.29 | 72.41+-0.67 | 74.05+-0.67 | t = 2.00, P = 0.04 |
