Table 1 List of statistically significant differentially expressed genes identified using DESeq2 comparing gene expression data in brains of male and female fish from Control and 60% GA*.
From: Gum Arabic modulates the microbiota-gut-brain axis and affects general fitness in zebrafish
Comparison | Gene name | Ensembl ID | Base mean | log2Fold Change | lfcSE (Standard Error) | p adj | Zebrafish Information Network |
|---|---|---|---|---|---|---|---|
Control group only (female VS male) | ier2a | ENSDARG00000099195 | 460.0414 | 1.25 | 0.233 | p < 0.01 | |
Control group only (female VS male) | egr1 | ENSDARG00000037421 | 4612.752 | 1.29 | 0.249 | p < 0.01 | |
Control group only (female VS male) | egr4 | ENSDARG00000077799 | 1441.57 | 1.48 | 0.312 | p < 0.05 | |
60% GA VS Control (females only) | cart1 | ENSDARG00000070930 | 12.66 | − 5.66 | 1.1380 | p < 0.05 | |
60% GA VS Control (females only) | slc1a2a | ENSDARG00000052138 | 9.29 | − 6.35 | 1.372 | p < 0.05 | |
60% GA VS Control (all samples without sex as covariate) | snoRA74 | ENSDARG00000102120 | 0.463 | 18.48 | 2.942 | p < 0.001 | Small nucleolar RNA |
60% GA VS Control (all samples without sex as covariate) | cart1 | ENSDARG00000070930 | 7.48 | − 4.72 | 0.896 | p < 0.01 | |
60% GA VS Control (all samples without sex as covariate) | clec3ba | ENSDARG00000076541 | 118.9782 | 3.05 | 0.649 | p < 0.05 |
