Table 2 Statistics of 15 polymorphic MIPs marker in 30 jute accessions.

From: Exploring the genomic landscape of mites and harnessing MITE insertion polymorphism markers in jute (Corchorus sp.)

Marker

LOCUS

Allele number

Major allele frequency

Heterozygosity

Gene diversity

PIC

MITE_1

GWHBCLC00000001|MITE|10,374,083|10,374,228

3

0.607143

0.544005

0.544005

0.272003

MITE_2

GWHBCLC00000001|MITE|11,045,131|11,045,740

2

0.615385

0.473373

0.473373

0.236686

MITE_3

GWHBCLC00000002|MITE|44,273,501|44,273,750

3

0.483333

0.676111

0.676111

0.338056

MITE_4

GWHBCLC00000002|MITE|44,493,639|44,493,904

3

0.4

0.651111

0.651111

0.325556

MITE_5

GWHBCLC00000003|MITE|17,865,351|17,865,612

3

0.5

0.673469

0.673469

0.336735

MITE_6

GWHBCLC00000003|MITE|1,845,945|1,846,323

3

0.833333

0.286667

0.286667

0.143333

MITE_7

GWHBCLC00000004|MITE|11,955,387|11,955,570

2

0.433333

0.702222

0.702222

0.351111

MITE_8

GWHBCLC00000004|MITE|12,267,144|12,267,445

3

0.433333

0.646667

0.646667

0.323333

MITE_9

GWHBCLC00000005|MITE|18,626,667|18,627,015

3

0.4375

0.653646

0.653646

0.326823

MITE_10

GWHBCLC00000005|MITE|19,826,687|19,827,393

3

0.5

0.531111

0.531111

0.265556

MITE_11

GWHBCLC00000005|MITE|33,768,045|33,768,371

2

0.589286

0.577168

0.577168

0.288584

MITE_12

GWHBCLC00000006|MITE|10,282,832|10,283,109

3

0.689655

0.466706

0.466706

0.233353

MITE_13

GWHBCLC00000006|MITE|10,766,558|10,766,641

3

0.586207

0.561237

0.561237

0.280618

MITE_14

GWHBCLC00000007|MITE|15,026,209|15,026,450

2

0.537037

0.633059

0.633059

0.316529

MITE_15

GWHBCLC00000007|MITE|15,804,094|15,804,476

2

0.633333

0.464444

0.464444

0.232222

Back to article page