Fig. 6
Diplotype clustering of (A) Cyp6 rp1 and (B) Cyp9k1 the gene cluster of An. funestus s.s. population from Kenya. The clustering dendrogram is accompanied by heterozygosity in shades of blue, SNP frequency in shades of grey and copy number variant frequencies in shades of brown. Clusters with low sample heterozygosity or inter-sample distances of zero are indicative of a selective sweep. The substitutions present in each individual are shown with blocks of the same colour indicating a shared variant. The darker the shade the higher the frequency.
