Table 1 Copy typing results by three technical Platforms.
From: Digital droplet PCR is an accurate and precise method to measure DNA copy number
Case ID | PFGE CN | ddPCR CN1 | ddPCR CN2 | ddPCR CN3 | ddPCR Final CN | qPCR CN1 | qPCR CN2 | qPCR CN3 | qPCR Final CN |
|---|---|---|---|---|---|---|---|---|---|
1 | 4 | 4.48 | 3.75 | 4.25 | 4 | 4.66 | 4.13 | 4.68 | 4 |
2 | 4 | 4.30 | 5.34 | 5.11 | 5 | 4.85 | 5.02 | 5.01 | 5 |
3 | 4 | 4.31 | 4.05 | 3.85 | 4 | 3.67 | 3.17 | 3.50 | 3 |
4 | 4 | 3.84 | 4.16 | 3.71 | 4 | 4.40 | 4.81 | 5.81 | 5 |
5 | 4 | 3.48 | 3.63 | 3.10 | 3 | 3.22 | 3.59 | 3.00 | 3 |
6 | 5 | 3.81 | 5.08 | 4.36 | 4 | 7.19 | 6.90 | 6.35 | 7 |
7 | 5 | 3.98 | 4.61 | 4.96 | 5 | 5.43 | 5.43 | 5.94 | 6 |
8 | 5 | 4.59 | 5.15 | 5.15 | 5 | 5.62 | 5.90 | 5.73 | 6 |
9 | 6 | 5.89 | 6.47 | 5.65 | 6 | 3.57 | 5.12 | 4.77 | 4 |
10 | 6 | 6.09 | 5.57 | 5.81 | 6 | 5.69 | 5.53 | 5.18 | 6 |
11 | 6 | 6.71 | 7.33 | 5.82 | 7 | 3.18 | 2.97 | 2.89 | 3 |
12 | 6 | 5.94 | 6.05 | 6.28 | 6 | 8.56 | 8.04 | 8.81 | 8 |
13 | 6 | 5.67 | 5.64 | 5.65 | 6 | 5.50 | 5.73 | 5.65 | 6 |
14 | 6 | 5.76 | 5.37 | 5.43 | 5 | 6.13 | 5.60 | 4.01 | 5 |
15 | 6 | 6.17 | 5.98 | 6.05 | 6 | 6.84 | 6.89 | 6.39 | 7 |
16 | 6 | 5.63 | 5.76 | 5.71 | 6 | 5.51 | 6.19 | 5.43 | 6 |
17 | 6 | 6.29 | 6.27 | 7.03 | 7 | 6.59 | 7.16 | 6.92 | 7 |
18 | 6 | 6.16 | 5.72 | 5.65 | 6 | 4.65 | 4.14 | 4.69 | 4 |
19 | 6 | 6.02 | 6.17 | 6.05 | 6 | 5.30 | 4.95 | 4.95 | 5 |
20 | 6 | 6.46 | 5.37 | 6.43 | 6 | 6.01 | 5.49 | 3.94 | 5 |
21 | 7 | 7.23 | 6.82 | 7.24 | 7 | 4.85 | 5.31 | 5.31 | 5 |
22 | 7 | 6.87 | 6.91 | 7.46 | 7 | 4.75 | 5.50 | 5.38 | 5 |
23 | 7 | 6.79 | 6.71 | 7.45 | 7 | 5.22 | 5.09 | 5.37 | 5 |
24 | 7 | 6.11 | 7.14 | 6.95 | 7 | 6.43 | 6.89 | 6.04 | 6 |
25 | 7 | 7.20 | 6.86 | 7.07 | 7 | 5.13 | 4.96 | 5.70 | 5 |
26 | 7 | 6.46 | 7.28 | 7.21 | 7 | 10.94 | 9.32 | 9.52 | 10 |
27 | 7 | 6.65 | 6.22 | 6.01 | 6 | 4.48 | 7.90 | 7.68 | 8 |
28 | 7 | 7.18 | 6.77 | 6.81 | 7 | 7.68 | 5.94 | 6.11 | 7 |
29 | 7 | 6.45 | 6.57 | 6.15 | 6 | 6.92 | 6.59 | 7.41 | 7 |
30 | 7 | 7.18 | 6.77 | 6.55 | 7 | 7.73 | 7.47 | 7.42 | 8 |
31 | 8 | 7.70 | 7.83 | 7.72 | 8 | 9.63 | 10.26 | 9.70 | 10 |
32 | 8 | 8.22 | 7.51 | 7.84 | 8 | 8.68 | 8.62 | 9.31 | 9 |
33 | 8 | 7.92 | 7.43 | 7.81 | 8 | 7.00 | 7.05 | 5.84 | 7 |
34 | 8 | 8.40 | 7.61 | 8.21 | 8 | 5.98 | 6.83 | 3.73 | 6 |
35 | 9 | 9.36 | 8.62 | 9.92 | 9 | 8.28 | 7.67 | 8.16 | 8 |
36 | 9 | 9.45 | 8.97 | 8.55 | 9 | 8.22 | 7.56 | 7.77 | 8 |
37 | 9 | 11.78 | 10.06 | 10.61 | 11 | 5.22 | 5.72 | 6.34 | 6 |
38 | 9 | 6.70 | 6.41 | 6.12 | 6 | 7.09 | 6.04 | 6.21 | 6 |
39 | 10 | 10.53 | 9.33 | 9.67 | 10 | 7.86 | 8.66 | 7.54 | 8 |
40 | 13 | 14.14 | 13.41 | 14.06 | 14 | 7.46 | 6.45 | 6.54 | 7 |