Table 2 Detailed breakdown of the 39 categories in OpenUrine dataset. The total count represents image-label pairs, as individual images may contain multiple particle types. The actual number of unique images is 790.
From: A multi-head YOLOv12 with self-supervised pretraining for urinary sediment particle detection
Label | Category | Number of boxes | Number of images | Description |
|---|---|---|---|---|
Muddy brown cast | Casts | 350 | 24 | Brown casts indicating acute tubular necrosis; typically associated with kidney injury |
Granular cast | Casts | 172 | 63 | Cylindrical structures formed from protein and cellular debris, indicating kidney damage |
Hyaline cast | Casts | 160 | 42 | Clear, colorless casts formed from protein; may indicate dehydration or kidney disease |
Waxy cast | Casts | 56 | 42 | Broad casts indicating chronic renal failure; they appear broad and are formed from degenerated cells |
Mixed cell cast | Casts | 44 | 41 | Casts containing various types of cells; their presence can indicate kidney pathology |
RBC cast | Casts | 20 | 19 | Casts formed from red blood cells; presence indicates glomerular damage or bleeding within the kidneys |
RBC | Cells | 5752 | 213 | Red blood cells; their presence in urine (hematuria) can indicate bleeding within the urinary tract |
WBC | Cells | 2654 | 210 | White blood cells; an increased number (pyuria) suggests infection or inflammation, such as a urinary tract infection |
Epithelial cell (squamous) | Cells | 889 | 175 | Flat cells from the urethra or vaginal lining; usually considered normal unless present in excess |
Epithelial cell (transitional) | Cells | 233 | 70 | Cells lining the bladder and ureters; increased numbers may suggest infection, inflammation, or, rarely, malignancy |
Suspected atypical cell | Cells | 187 | 44 | Unusual cells that may require further investigation to rule out malignancy. |
Epithelial cell (renal) | Cells | 126 | 46 | Cells originating from the renal tubules; their presence may indicate tubular injury or necrosis |
WBC clump | Cells | 103 | 16 | Aggregates of white blood cells; may indicate significant infection or inflammation within the urinary tract |
Lipid cast | Cells | 24 | 22 | Casts containing fat droplets, indicating nephrotic syndrome when present in excess |
RBC clump | Cells | 24 | 5 | Aggregates of red blood cells; may indicate significant bleeding or injury within the urinary tract |
Calcium oxalate | Crystals | 2872 | 115 | Colorless, envelope-shaped (dihydrate) or dumbbell-shaped (monohydrate) crystals; commonly seen in individuals who consume oxalate-rich foods or have kidney stones |
Amorphous | Crystals | 951 | 35 | Aggregates of fine granules; amorphous urates appear in acidic urine, while amorphous phosphates appear in alkaline urine; generally of little clinical significance |
Triple phosphate | Crystals | 778 | 31 | Coffin-lid shaped crystals; typically found in alkaline urine and associated with urinary tract infections |
Uric acid | Crystals | 699 | 42 | Yellow to reddish-brown, diamond or barrel-shaped crystals; common in acidic urine and can be associated with gout or chemotherapy |
Ammonium biurat | Crystals | 394 | 27 | Yellow-brown, thorn-apple shaped crystals; often found in old or poorly preserved urine samples |
Hippuric acid | Crystals | 210 | 8 | Colorless or pale yellow needles or prisms; rare and typically of little clinical significance |
Calcium phosphate | Crystals | 200 | 27 | Colorless, needle-like or rosette formations; typically found in alkaline urine; generally not clinically significant |
Cystine | Crystals | 137 | 11 | Colorless, hexagonal plates; indicative of cystinuria, a rare genetic disorder |
Leucine | Crystals | 91 | 11 | Spherical crystals with concentric rings and radial striations; associated with severe liver disease |
Tyrosine crystal | Crystals | 81 | 20 | Fine, needle-like crystals; may indicate severe liver disease |
Calcium carbonate | Crystals | 76 | 4 | Small, colorless granules or dumbbell-shaped crystals; typically found in alkaline urine; usually not clinically significant |
Cholesterol | Crystals | 58 | 13 | Large, flat, transparent plates with notched corners; may be seen in nephrotic syndrome. |
Bilirubin | Crystals | 43 | 11 | Yellow to reddish brown, needle-like or granular crystals, associated with liver disorders |
Bacteria | Microorganisms | 12406 | 248 | Their presence, especially in large numbers, suggests a urinary tract infection |
Yeast | Microorganisms | 446 | 32 | Often appear as budding cells; can indicate a yeast infection, particularly in diabetic patients |
Enterobius vermicularis egg | Microorganisms | 81 | 13 | Oval-shaped eggs with a characteristic flattened side; indicates pinworm infection, often due to fecal contamination |
Fungal hyphae | Microorganisms | 72 | 10 | Branching filamentous structures; indicate a fungal infection, more common in immunocompromised individuals |
Schistosoma haematobium eggs | Microorganisms | 31 | 17 | Oval eggs with a terminal spine; indicate schistosomiasis, a parasitic infection affecting the urinary tract |
Trichomonas vaginalis | Microorganisms | 26 | 17 | A motile parasite; its presence indicates trichomoniasis, a sexually transmitted infection |
Sperm | Others | 382 | 21 | May be present in urine after ejaculation; typically not clinically significant |
Mucus | Others | 198 | 59 | Thread-like structures; generally not clinically significant but can be confused with casts |
Fat droplets | Others | 53 | 15 | Free-floating droplets; indicate lipiduria, often associated with nephrotic syndrome |
Oval fat bodies | Others | 38 | 20 | Renal tubular cells filled with fat droplets; suggestive of nephrotic syndrome |
Artifact | Artifact | 168 | 94 | Any foreign substance or error that does not represent actual urine components |
Total | Â | 31285 | 790 | Â |