Table 1 The key parameters such as docking score, hydrogen bond interactions, average RMSD, and binding free energy which were assessed to evaluate complex stability and affinity.
Molecule | Docking score (kcal/mol) | H-bonds | Avg. RMSD (nm) | Binding free energy (kcal/mol) | Interpretations |
|---|---|---|---|---|---|
3 | − 5.63 | 1 | 0.288 | − 29.65 | Stable, good affinity |
3a | − 5.55 | 2 | 0.558 | − 33.56 | High affinity, flexible |
5 | − 5.51 | 1 | 0.284 | − 30.21 | Most balanced |
6 | − 5.57 | 2 | 0.560 | − 23.41 | Least stable |
7 | − 6.67 | 1 | 0.378 | − 35.66 | Best energy, moderately stable |