Table 5 AMR testing of K. pneumoniae isolates with corresponding resistance Genes.

From: Association of the existence of CRISPR-Cas system and antimicrobial resistance in multi-drug resistant Klebsiella pneumoniae in Egypt

Prevalence of target genes among K. pneumoniae isolates

NO. (%)

Antimicrobial Susceptibility Testing of resistant K. pneumoniae Isolates using Kirby–Bauer disc diffusion method

Amoxicillin -clavulanate

NO. (%)

Ceftriaxone

NO. (%)

Cefoxitin

NO. (%)

Cefuroxime

NO. (%)

Ceftazidime

NO. (%)

Piperacillin-tazobactam

NO. (%)

Imipenem

NO. (%)

Meropenem NO. (%)

ESBLs resistance encoding genes

blaTEM 38(92.7)

37 (97.4)

35 (92.1)

33(86.8)

37(97.4)

33 (86.8)

32 (84.2)

26 (68.4)

30 (78.9)

Carbapenem resistance encoding genes

blaNDM

39(95.1)

38(97.4)

36(92.3)

34(87.2)

38(97.4)

34(87.2)

33(84.6)

27 (69.2)

30 (76.9)

blaOXA

39(95.1)

38 (97.4)

36 (92.3)

34 (87.2)

38(97.4)

34 (87.2)

33 (84.6)

27 (69.2)

30 (76.9)

blaVIM

16(39)

16(100)

15(93.8)

15(93.8)

16(100)

15(93.8)

15(93.8)

15 (93.8)

15 (93.8)

blaIMP

8(19.5)

8 (100)

8 (100)

8 (100)

8 (100)

8 (100)

8 (100)

6 (75)

7 (87.5)

blaKPC

6(14.6)

6 (100)

5 (83.3)

5 (83.3)

6 (100)

5 (83.3)

5(83.3)

5 (83.3)

5 (83.3)

Colistin resistance genes

Colistin

mcr-1

29(70.7)

24(82.8)

mcr-2

27(65.9)

18(66.7)

Aminoglycoside resistance genes

Gentamycin

Amikacin

aac(3)-Ia

5(12.2)

5(100)

5(100)

aac(3)-IIa

35 (87.8)

26(74.3)

24(68.6)