Table 1 PCR primers used in this study.
Primers | Sequence (5’ to 3’) (restriction sites: underlined) | Target |
|---|---|---|
For generation of isogenic mutant and complementation strains | ||
esxA_BF | ATCCATCGTATCGCTTCAAA | up stream fragment of esxA |
esxA_BR_EcoRI | CCGGAATTCGCAATTCTTCTGGAGTTA | |
esxA_AF_EcoRI | CCGGAATTCTTGCAGCACAAATTCATTA | down stream fragment of esxA |
esxA_AR | ACTGTTCACATCCAGTACTTT | |
essC_BF | AATGTGAGTCTTAAATCGGA | up stream fragment of essC |
essC_BR_EcoRI | CGATCGGAATTCTTGCTTTACAGGAGTATCGA | |
esxC_AF_EcoRI | CGATCGGAATTCTTGCTTTACAGGAGTATCGA | down stream fragment of essC |
essC_AR | ATCATCAGAAGTCAGCGG | |
esxA_EcoRI | GCCGGAATTCGGTAAATGAAGGCATCT | complementation of esxA |
esxAR _EcoRI | ACCGGAATTCTTAATGATGATGATGATGATGAATTTGTGCTGCAATATC | |
essCF_BclI | CGATGCTGATCAATGACAAAACAAGTAATTTTCT | complementation of essC |
essCR_BclI | TATGGCTGATCATTATTCTACTCCTTTCACTAA | |
KanF | CTCGGAATTCCAAAAGAGGAAAGGAAATAATAAATG | Kanamycin gene |
KanR | GACGGAATTCCTAAAACAATTCATCCAGTAA | |
For construction of recombinant EsxA | ||
rEsxA-BamHI F | TAGCGCGGATCCATGGCTCGGATTAAATTAAC | rEsxA |
rEsxA-BamHI R | CTACGCGGATCCTTAATGAATTTGTGCTGCAAT | |