Table 2 Interatomic contacts detected on the interface of the complex Mpro-AGVAKAKAV, calculated using the COCαDA tool.

From: A hybrid evolutionary and structural method for AI-guided peptide inhibitor design using AlphaFold and Rosetta

#

Contact

Chain1

R1

Atom1

Chain2

R2

Atom2

Distance

1

T26/V9

A

T26

N

B

V9

O

2.78

A

T26

O

B

V9

N

3.19

2

F140/K7

A

F140

O

B

K7

NZ

2.63

3

G143/K7

A

G143

N

B

K7

O

2.89

4

G143/A8

A

G143

N

B

A8

O

3.68

5

S144/K7

A

S144

N

B

K7

O

3.14

6

C145/K7

A

C145

N

B

K7

O

3.13

A

C145

SG

B

K7

N

3.07

A

C145

SG

B

K7

O

3.55

7

E166/K5

A

E166

N

B

K5

O

2.87

A

E166

O

B

K5

N

2.85

8

E166/K7

A

E166

OE1

B

K7

NZ

2.83

A

E166

OE2

B

K7

NZ

2.9

9

Q189/A6

A

Q189

OE1

B

A6

N

3.29

10

T190/A4

A

T190

O

B

A4

N

2.89

11

Q192/G2

A

Q192

N

B

G2

O

3.73