Table 2 Top ten of significantly clustered GO terms.

From: A nitrogen deprivation gradient triggers transcriptional reprogramming for lipid biosynthesis in Auxenochlorella pyrenoidosa

Group

GO Id

GO Term

Up-gene

Down-gene

p-value

FDR

N1 vs. N1.5

GO:0042128

nitrate assimilation

0

8

1.72E-10

4.74E-08

 

GO:0006847

plasma membrane acetate transport

5

0

5.01E-08

4.59E-06

 

GO:0015123

acetate transmembrane transporter activity

5

0

5.01E-08

4.59E-06

 

GO:0006809

nitric oxide biosynthetic process

0

4

6.49E-07

2.98E-05

 

GO:0009703

nitrate reductase (NADH) activity

0

4

6.49E-07

2.98E-05

 

GO:0050464

nitrate reductase (NADPH) activity

0

4

6.49E-07

2.98E-05

 

GO:0004024

alcohol dehydrogenase activity, zinc-dependent

4

0

1.92E-06

6.70E-05

 

GO:0009514

glyoxysome

6

0

1.95E-06

6.70E-05

 

GO:0043458

ethanol biosynthetic process involved in glucose fermentation to ethanol

4

0

4.41E-06

0.000121

 

GO:0004354

glutamate dehydrogenase (NADP+) activity

3

1

4.41E-06

0.000121

N0.5 vsN1.5

GO:0009507

chloroplast

72

234

1.99E-23

2.25E-20

 

GO:0009535

chloroplast thylakoid membrane

10

89

1.62E-18

9.14E-16

 

GO:0015995

chlorophyll biosynthetic process

0

31

1.62E-17

6.10E-15

 

GO:0009570

chloroplast stroma

24

84

8.68E-13

2.45E-10

 

GO:0015979

photosynthesis

10

35

1.15E-11

2.59E-09

 

GO:0009941

chloroplast envelope

18

70

1.40E-11

2.63E-09

 

GO:0009534

chloroplast thylakoid

2

39

6.48E-10

1.05E-07

 

GO:0006782

protoporphyrinogen IX biosynthetic process

0

12

1.01E-09

1.43E-07

 

GO:0009579

thylakoid

3

34

2.96E-08

3.72E-06

 

GO:0009522

photosystem I

0

17

1.98E-06

0.000223

N0 vs. N1.5

GO:0005730

nucleolus

5

81

4.20E-10

4.79E-07

 

GO:0032040

small-subunit processome

0

25

1.50E-09

8.53E-07

 

GO:0006099

tricarboxylic acid cycle

23

0

3.69E-09

1.33E-06

 

GO:0015293

symporter activity

22

5

4.68E-09

1.33E-06

 

GO:0006364

rRNA processing

1

41

5.19E-08

1.18E-05

 

GO:0005887

integral component of plasma membrane

20

6

1.43E-07

2.72E-05

 

GO:0003333

amino acid transmembrane transport

18

1

1.68E-06

0.000238

 

GO:0015171

amino acid transmembrane transporter activity

18

1

1.68E-06

0.000238

 

GO:0030686

90 S preribosome

0

10

2.64E-06

0.000333

 

GO:0004712

protein serine/threonine/tyrosine kinase activity

30

19

4.34E-06

0.000494

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