Table 4 Differentially expressed genes of key metabolic pathways in A. pyrenoidosa SHOU-1002 under varying nitrogen deprivation (N1, N0.5 and N0 groups).
Transcript_id | Metabolic pathway | Protein | Expression changes | p-value | FDR |
|---|---|---|---|---|---|
TRINITY_DN1021_c0_g1_i2_3 | Calvin cycle | Ribulose bisphosphate carboxylase large chain (rbcL) | Down | 8.23E-15 | 5.37E-14 |
TRINITY_DN1392_c0_g1_i1_1 | Ribulose bisphosphate carboxylase small chain (rbcS) | Down | 1.20E-14 | 7.73E-14 | |
TRINITY_DN2400_c0_g1_i1_2 | Phosphoribulokinase (PRK) | Down | 9.18E-17 | 6.71E-16 | |
TRINITY_DN3879_c0_g1_i2_4 | Sedoheptulose-1,7-bisphosphatase (SBPase) | Down | 2.50E-09 | 1.11E-08 | |
TRINITY_DN5924_c0_g1_i3_3 | Glycolysis | Hexokinase (HK) | Up | 9.38E-09 | 3.99E-08 |
TRINITY_DN4190_c0_g1_i1_1 | Phosphofructokinase (PFK) | Up | 1.07E-07 | 4.18E-07 | |
TRINITY_DN774_c0_g1_i1_1 | Pyruvate kinase (PK) | Up | 3.50E-07 | 1.30E-06 | |
TRINITY_DN1331_c0_g1_i1_1 | TCA cycle | Pyruvate dehydrogenase (aceE) | Up | 2.91E-06 | 9.93E-06 |
TRINITY_DN6504_c0_g1_i2_1 | Citrate synthase (CIS) | Down | 4.40E-06 | 1.47E-05 | |
TRINITY_DN5433_c0_g1_i2_4 | Isocitrate dehydrogenase (IDH) | Down | 5.12E-05 | 1.52E-04 | |
TRINITY_DN5943_c0_g1_i1_3 | Malate dehydrogenase (MDH) | Up | 2.11E-04 | 5.75E-04 | |
TRINITY_DN5081_c0_g1_i2_4 | Kennedy | Glycerol-3-phosphate acyltransferase (GPAT) | Up | 3.71E-04 | 9.78E-04 |
TRINITY_DN513_c0_g1_i1_2 | Lysophosphatidic acid acyltransferase (LPAAT) | Up | 6.21E-04 | 1.59E-03 | |
TRINITY_DN7223_c0_g2_i1_3 | Diacylglycerol acyltransferase (DGAT) | Up | 6.79E-04 | 1.73E-03 | |
TRINITY_DN5241_c0_g2_i3_4 | Phosphatidic acid phosphatase (PAP) | Up | 8.53E-04 | 2.14E-03 | |
TRINITY_DN6859_c0_g1_i9_2 | Acetyl-CoA carboxylase (ACC) | Up | 3.78E-03 | 8.50E-03 | |
TRINITY_DN7324_c0_g1_i4_1 | Malonyl-CoA: ACP transacylase (fabD) | Up | 4.99E-03 | 1.10E-02 | |
TRINITY_DN3386_c1_g1_i1_1 | β-Ketoacyl-ACP synthase (fabF) | Up | 1.05E-02 | 2.15E-02 |
