Fig. 5
From: Genome-wide study of salt tolerance in USDA tomato germplasm at seedling stage
The multiple Manhattan plot (left) and Q-Q plot (right) compare the GLM, MLM, MLMM, FarmCPU, and BLINK models in GAPIT3 for the RST_C salt tolerance trait in 265 accessions. In the Manhattan plots, the x-axis represents the 12 tomato chromosomes, and the y-axis shows the LOD scores (− log₁₀(P-value)). In the Q-Q plots, the x-axis indicates the expected LOD scores (− log₁₀(P-value)), while the y-axis represents the observed LOD scores (− log₁₀(P-value)).
