Fig. 2
From: Streamlining whole genome sequencing for clinical diagnostics with ONT technology
Sequencing and assembly metrics for different pathogen groups. (A) Sequencing data presenting key metrics such as total sequence bases, average read length, sequencing depth, and the percentage of the genome covered by at least fivefold sequencing reads. (B) Assembly metrics, including the number of contigs, length of the largest contig, assembly coverage rate, and assembly accuracy compared with the reference genome. Different colors indicate different species within each group: A. pittii is depicted in red, A. nosocomialis in light blue, K. quasipneumoniae in orange, and E. coli in purple. Hollow circles in (A) and crosses in (B) indicate samples that only have draft assemblies generated using Flye.
