Fig. 2 | Scientific Reports

Fig. 2

From: Metatranscriptomic identification of novel RNA viruses from raccoon dog (Nyctereutes procyonoides) feces in Japan

Fig. 2

(A) Genome structure of CaKoV. (B) Similarity plots of LC849238_CaKoV/Raccoon dog/Kodo2023-5/2023/JPN (red curve) and LC849235_CaKoV/Raccoon dog/Izus2024-3/2024/JPN (blue curve), using LC849239_CaKoV/Raccoon dog/Kodo2023-40/2023/JPN as the query sequence. The analysis was performed with a sliding window of 200 nucleotides and a step size of 20 nucleotides. (C) Recombination analysis of the genome comparing Kodo2023-5/2023 vs Kodo2023-40/2023 (yellow curve), Kodo2023-5/2023 vs Izus2024-3/2024 (blue-green curve), and Kodo2023-40/2023 vs Izus2024-3/2024 (purple curve).

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