Table 1 30 Most abundant antimicrobial resistance genes (ARGs) with their class, functions and abundance.
Genes | Description | Mechanism | Droppings | Sediment |
|---|---|---|---|---|
pvdL | Peptide synthase PvdL Pyoverdine | Nutritional/Metabolic factor | 0% | 100% |
pvdI | Peptide synthase Pyoverdine | Nutritional/Metabolic factor | 0% | 100% |
chpA | Signal transduction system Type IV pili | Adherence | 0% | 100% |
pchF | Pyochelin synthetase PchF Pyochelin | Nutritional/Metabolic factor | 0% | 100% |
clpV1 | Type VI secretion system AAA + family ATPase HSI-1 | Effector delivery system | 32.38% | 67.62% |
ppkA | Serine/threonine protein kinase PpkA HSI-1 | Effector delivery system | 28.11% | 71.89% |
tssH-5/clpV | Clp-type ATPase chaperone protein T6SS-1 | Effector delivery system | 0% | 100% |
tssH | Type VI secretion system ATPase TssH HSI-2 | Effector delivery system | 35.72% | 64.28% |
pchE | Dihydroaeruginoic acid synthetase PchE Pyochelin | Nutritional/Metabolic factor | 0% | 100% |
algC | Phosphomannomutase AlgC Alginate | Biofilm | 34.03% | 65.97% |
pvdD | Pyoverdine synthetase D Pyoverdine | Nutritional/Metabolic factor | 0% | 100% |
icmF1/tssM1 | Type VI secretion system protein IcmF1 HSI-1 | Effector delivery system | 0% | 100% |
phzE1 | Phenazine biosynthesis protein PhzE Pyocyanin | Nutritional/Metabolic factor | 27.99% | 72.01% |
pilJ | Twitching motility protein PilJ Type IV pili | Adherence | 37.59% | 62.41% |
flhA | Flagellar biosynthesis protein FlhA Flagella | Motility | 38.95% | 61.05% |
pvdJ | Pyoverdine biosynthesis protein PvdJ Pyoverdine | Nutritional/Metabolic factor | 0% | 100% |
tse5/rhsP1 | Toxin protein Tse5 HSI-1 T6SS secreted effectors | Effector delivery system | 0% | 100% |
xcpR | General secretion pathway protein E Xcp secretion system | Effector delivery system | 32.44% | 67.56% |
PA1458 | Two-component sensor Flagella | Motility | 33.4% | 66.6% |
cheA | Chemotaxis two-component sensor kinase CheA Flagella | Motility | 0% | 100% |
tsr | Methyl-accepting chemotaxis protein I Flagella | Motility | 0% | 100% |
pilT | Twitching motility protein PilT Type IV pili | Adherence | 41.06% | 58.94% |
fleQ | Transcriptional regulator FleQ Flagella | Motility | 32.82% | 67.18% |
tssM | Type VI secretion system membrane subunit TssM HSI- 2 | Effector delivery system | 0% | 100% |
fimX | Protein FimX Type IV pili | Adherence | 30.31% | 69.69% |
