Table 3 Pathogenic variants of 28 eoHM probands:RP, Retinitis pigmentosa; CSNB,congenital stationary night blindness;GA, gyrate atrophy of the choroid and retina; FEVR, Familial exudative vitreoretinopathy; eoHM,early-onset high myopia; LCA, Leber congenital amaurosis.
No | Chromosome | Nucleotiide change | Protein change | Variant | Mutation types | Zygotic type | Disease |
|---|---|---|---|---|---|---|---|
F1 | chr1:216052432 | c.8232G > C | p.Trp2744Cys | USH2A | Missense | Compound heterozygous | RP |
chr1:216172258 | c.6628C > G | p.Pro2210Ala | Missense | ||||
F2 | chr12:48379984 | c.1527 + 135G > A | NA | COL2A1 | Intronic | Heterozygous | Stickler syndrome |
F3 | chr12:48369108 | c.3878G > A | p.Trp1293Ter | COL2A1 | Nonsense | Heterozygous | Stickler syndrome |
F4 | chrX:38145846–38145847 | c.2405_2406del | p.Glu802GlyfsTer32 | RPGR | Frameshift | Hemizygous | eoHM |
F5 | chr12:48367270 | c.4384A > G | p.Ile1462Val | COL2A1 | Missense | Heterozygous | Stikler syndrome |
F6 | chrX:49088170 | c.245G > A | p.Arg82Gln | CACNA1F | Missense | Hemizygous | CSNB |
F7 | chrX:38146014 | c.2234_2237del | p.Arg745fs | RPGR | Frameshift | Hemizygous | eoHM |
F8 | chr10:126092416 | c.C722T | p.Pro241Leu | OAT | Missense | Homozygous | GA |
F9 | chr20:10620246 | c.3557C > A | p.Pro1186His | JAG1 | Missense | Homozygous | eoHM |
F10 | chr9:137710529 | c.4258G > A | p.Gly1420Arg | COL5A1 | Missense | Heterozygous | eoHM |
F11 | chr5:131544983 | c.751G > A | p.Glu251Lys | P4HA2 | Missense | Heterozygous | eoHM |
F12 | chrX: 24757572 | c.2103 T > G | p.Ile701Met | POLA1 | Missense | Hemizygous | eoHM |
F13 | chr1:103487274 | c.1333G > C | p.Val445Leu | COL11A1 | Missense | Heterozygous | Stikler syndrome |
F14 | chr4:629741 | c.694G > A | p.Glu232Lys | PDE6B | Missense | Compound heterozygous | RP |
chr4:658738 | c.2193 + 5G > A | NA | Splicing | ||||
F15 | chrX:246713321 | c.513G > A | p.Trp171Ter | RP2 | Nonsense | Hemizygous | RP |
F16 | chr12:48372457 | c.2818C > T | p.Arg940Ter | COL2A1 | Nonsense | Heterozygous | Stikler syndrome |
F17 | chr20:62614494 | c.166G > A | p.Val56Ile | PRPF6 | Missense | Heterozygous | RP |
F18 | chr6:66204718 | c.586A > C | p.Lys196Gln | EYS | Missense | Compound Heterozygous | RP |
chr6:65336093 | c.3489 T > A | p.Asn1163Lys | Missense | ||||
F19 | chr16:75579723 | c.438 + 1G > C | NA | TMEM231 | Splicing | Compound Heterozygous | eoHM |
chr16:75579737 | c.425C > G | p.Ser142Cys | Missense | ||||
F20 | chr14:57268599 | c.748G > A | p.Gly250Arg | OTX2 | Missense | Heterozygous | eoHM |
F21 | chr9:124079400 | c.G943A | p.Val315Met | GSN | Missense | Heterozygous | eoHM |
F22 | chr10:71060618 | c.27 + 1G > A | NA | HK1 | Splicing | Heterozygous | eoHM |
F23 | chr7:120450533 | c.452A > T | p.Asn151Ile | TSPAN12 | Missense | Heterozygous | FEVR |
F24 | chr5:110441840 | c.1346C > T | p.Ala449Val | WDR36 | Missense | Heterozygous | Rod-cone dystrophies |
F25 | chr12:48373317 | c.2710C > T | p.Arg904Cys | COL2A1 | Missense | Heterozygous | Stikler syndrome |
F26 | chr1:103453242 | c.2485G > A | p.Gly829Ser | COL11A1 | Missense | Heterozygous | Stikler syndrome |
F27 | chr22:25603093 | c.550T > C | p.Trp184Arg | CRYBB3 | Missense | Heterozygous | eoHM |
F28 | chr17:6329030 | c.905G > T | p.Arg302Leu | AIPL1 | Missense | Heterozygous | Rod-cone dystrophies, keratoconus |