Table 5 Somatic SNV/indel detected by NGS and validated using ddPCR.
From: A model workflow for microfluidic enrichment and genetic analysis of circulating melanoma cells
| Â | Â | WGA samples | Lysate samples | cfDNA samples | ||||
|---|---|---|---|---|---|---|---|---|
| Â | Â | EXP #1_WGA | EXP #2_WGA | EXP #3_WGA | EXP #2_LYS | EXP #3_LYS | cfDNA_T0 | cfDNA_P |
GNAQ | NGS MAF% | 2.7 | 3.3 | 87.8 | 6.3 | 92.6 | 6.1 | 59.4 |
ddPCR MAF% | 2 | 6.2 | 94 | ND | ND | 6.2 | 69.6 | |
BAP1 | NGS MAF% | 2.3 | 5.6 | 87.3 | 3.10 | 90.6 | 4.0 | 46.6 |
ddPCR MAF% | NA | NA | NA | NA | NA | NA | NA | |
