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ATF4 regulates mitochondrial dysfunction and mitophagy, contributing to corneal endothelial apoptosis
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  • Published: 21 January 2026

ATF4 regulates mitochondrial dysfunction and mitophagy, contributing to corneal endothelial apoptosis

  • Saba Qureshi1,
  • Stefan Y. Kim1 na1,
  • Stephanie Lee1 na1,
  • Lukas Ritzer1,
  • William Steidl1,
  • Gayle Joliet Krest2,
  • Anisha Kasi1 &
  • …
  • Varun Kumar1,3,4 

Scientific Reports , Article number:  (2026) Cite this article

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We are providing an unedited version of this manuscript to give early access to its findings. Before final publication, the manuscript will undergo further editing. Please note there may be errors present which affect the content, and all legal disclaimers apply.

Subjects

  • Cell biology
  • Diseases
  • Molecular biology

Abstract

Endoplasmic reticulum (ER) stress, mitochondrial dysfunction, and mitophagy are known to contribute independently to corneal endothelial cell (CEnC) apoptosis in Fuchs’ endothelial corneal dystrophy (FECD). However, the role of a specific ER stress pathway (PERK-ATF4-CHOP) in regulating these events is unknown. This study aims to investigate the role of ATF4 in regulating mitochondrial dysfunction and mitophagy, which ultimately leads to CEnC apoptosis. Human corneal endothelial cell line (21T), Fuchs’ corneal endothelial cell line (F35T), and primary human corneal endothelial cells were treated with ER stressor tunicamycin (Tun). ATF4 siRNA was used to knock down ATF4 in 21T cell line and primary corneal endothelial cells. Mitophagy and apoptotic proteins were analyzed using Western blotting. ATF4+/− and ATF4 +/+ mice were irradiated with UVA to assess ER stress and corneal endothelial apoptosis. F35T cell line had significantly increased expression of the ER stress pathway as well as caspase-mediated apoptotic molecules compared to 21T at baseline, which further increased after Tun treatment. F35T cells exhibited significantly decreased mitochondrial ATP and MMP, and increased mitochondrial fragmentation, which was further exacerbated after Tun. F35T cells also demonstrated inhibition of mitophagy, similar to 21T, after treatment with tunicamycin, despite the upregulation of mitophagy initiators. ATF4 knockdown attenuated ER and mitochondrial stress proteins, rescued mitochondrial membrane potential (MMP) loss, downregulated mitochondrial fragmentation, activated mitophagy, and prevented CEnC death under chronic ER stress. ATF4+/− mice had increased CE numbers, with improved cellular morphology and decreased ER stress marker CHOP expression, compared to ATF4+/+ mice post-UVA. Pro-apoptotic ATF4 induction following ER stress disrupts mitochondrial function, leading to mitophagy inhibition and CEnC apoptosis. This study highlights the importance of ATF4 in ER-mitochondrial crosstalk and its contribution to CEnC apoptosis in FECD.

Data availability

Data generated in this study will be available from the corresponding author upon request.

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Acknowledgements

We sincerely thank Allison Sowa, Bill Janssen for electron microscopy processing and imaging at The Microscopy CoRE, Icahn School of Medicine at Mount Sinai. We also thank Ula V. Jurkunas (Schepens Eye Research Institute, Harvard University) for providing HCEnC-21T cell line and Albert Jun (Wilmer Eye Institute, John Hopkins University) for providing F35T cell line.

Funding

Supported by NIH/NEI (R00EY031339), Mount Sinai Seed Money, New York Eye and Ear Foundation, Sarah K de Coizart Charitable Trust/Foundation awarded to V.K. and Challenge Grant from Research to Prevent Blindness awarded to ophthalmology department.

Author information

Author notes
  1. Stefan Y. Kim and Stephanie Lee contributed equally to this work.

Authors and Affiliations

  1. Eye and Vision Research Institute, Department of Ophthalmology, Icahn School of Medicine at Mount Sinai, New York, NY, USA

    Saba Qureshi, Stefan Y. Kim, Stephanie Lee, Lukas Ritzer, William Steidl, Anisha Kasi & Varun Kumar

  2. Columbia University, New York, USA

    Gayle Joliet Krest

  3. Department of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA

    Varun Kumar

  4. Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Pl, New York, NY, 10029, USA

    Varun Kumar

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Contributions

SQ and VK performed experiments, analyzed data, wrote, and revised the manuscript. SYK, SL, LR, WS, GJK, and AK performed experiments and analyzed the data. VK is responsible for all the funding of the lab.

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Correspondence to Varun Kumar.

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Qureshi, S., Kim, S.Y., Lee, S. et al. ATF4 regulates mitochondrial dysfunction and mitophagy, contributing to corneal endothelial apoptosis. Sci Rep (2026). https://doi.org/10.1038/s41598-026-36453-x

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  • Received: 02 October 2025

  • Accepted: 13 January 2026

  • Published: 21 January 2026

  • DOI: https://doi.org/10.1038/s41598-026-36453-x

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Keywords

  • ATF4
  • Mitochondrial stress
  • Mitophagy
  • ER stress
  • Cell survival
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