Table 3 Overview of resistome and mobilome in UPE7 and UPE139 strains.

From: Genomic characterization of multidrug-resistant Escherichia coli strains identified from patients with urinary tract infection in Egypt

 

UPE7

UPE139

MLST

ST692a – ST410b

ST650a – ST361b

pMLST

IncF [F1:A1:B49]

IncF [F31:A1:B49]

Serotype

O8:H9

O9:H30

CH type

4–24 (fumC4, fimH24)

99 − 54 (fumC99, fimH54)

Antimicrobial Resistance Genes

β-lactamase

bla CMY−2

bla CTM−X−15

bla TEM−12

bla CTM−X−15

Aminoglycoside

aph(3’’)-Ib

aph(6)-Id

aac(3)-IIa

aac(3)-IId

aadA5

aph(3’’)-Ib

aph(6)-Id

aadA5

Macrolide

mphA

mdfA

mphA

mdfA

Tetracycline

tetA

tetR

tetA

tetD

tetR

Quinolone

qnrS1

qnrS1

 

Polymyxin

pmrD

pmrG

arnABCDTEF

pmrD

pmrG

arnABCDTEF

Plasmids

IncFII

IncFIA

IncFIB

Col(BS512)

IncFII

IncFIA

IncFIB

IncQ1

IncY

Chromosomal mutations

gyrA (S83L, D87N)

parC (S80I)

parE (S458A)

gyrA (S83L, D87N)

parC (S80I)

parE (S458A)

  1. aMLST, Pasteur scheme; bMLST, Achtman scheme.