Table 2 The strain SKAM2 genome harbors predicted genes implicated in IAA biosynthesis.
Gene annotation | Gene Name | Chromosome location | Name of pathways |
|---|---|---|---|
Indole-3-pyruvate decarboxylase | ipdC | 1,099,675–1,100,499 (NAKAJHDB_02555) | Tryptophan-dependent IAA pathway |
4,4’-diaponeurosporen-aldehyde dehydrogenase | aldH1 | (276299–277666) (NAKAJHDB_01741) | Tryptophan-dependent IAA pathway |
Tryptophan synthase alpha chain | trpA | 237,227–238,003 (NAKAJHDB_01700) | Tryptophan biosynthesis |
Tryptophan synthase beta chain | trpB | 236,030–237,223 (NAKAJHDB_01699) | Tryptophan biosynthesis |
Indole-3-glycerol phosphate synthas 3 | trpC | 234,661–235,422 (NAKAJHDB_01697) | Tryptophan biosynthesis |
Anthranilate phosphoribosyltransferase 2 | trpD2 | 233,634–234,659 (NAKAJHDB_01696) | Tryptophan biosynthesis |
Anthranilate synthase component 1 | trpE | 231,635–233,053 (NAKAJHDB_01694) | Tryptophan biosynthesis |
N-(5’-phosphoribosyl) anthranilate isomerase | trpF | 235,419–236,033 (NAKAJHDB_01698) | Tryptophan biosynthesis |
Tryptophan decarboxylase | - | 2,229,182–2,230,636 (NAKAJHDB_03688) | Tryptophan biosynthesis |
