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Molecular and spatial heterogeneity of macrophage like vascular smooth muscle cells in abdominal aortic aneurysms associated with intraluminal thrombus
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  • Published: 16 March 2026

Molecular and spatial heterogeneity of macrophage like vascular smooth muscle cells in abdominal aortic aneurysms associated with intraluminal thrombus

  • Xiaoying Ma1,2 na1,
  • Bowen Liang1 na1,
  • Qingsheng Lu1 &
  • …
  • Chao Song1 

Scientific Reports , Article number:  (2026) Cite this article

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We are providing an unedited version of this manuscript to give early access to its findings. Before final publication, the manuscript will undergo further editing. Please note there may be errors present which affect the content, and all legal disclaimers apply.

Subjects

  • Cardiology
  • Computational biology and bioinformatics
  • Diseases
  • Immunology

Abstract

Abdominal aortic aneurysm (AAA) is a common cardiovascular disease resulting in high mortality rate due to rupture. Intraluminal thrombus (ILT) is involved in AAA progression via both biomechanically protective and biochemically destructive properties. In this study, we utilized multiplex immunofluorescence and GeoMx Digital Spatial Profiler to explore the following issues: (a) Is ILT associated with the phenotypic switching of vascular smooth muscle cells (VSMCs) in aortic aneurysms? (b) Does ILT enrich macrophage-like VSMCs in aortic aneurysms? (c) What role do macrophage-like VSMCs play in aortic aneurysms? We found that the proportion of CD68 + SMA+ double-positive cells was significantly increased in AAA with thrombus. Differential gene expression, gene set enrichment and gene signature analyses were performed, in which enrichments were mainly related to VSMC phenotypic switching, matrix remodeling and inflammatory response. The cell-type identification by estimating relative subsets of RNA transcripts (CIBERSORT) was used to quantify the proportions of immune infiltration and the result was that the proportions of naive B cells, M1-type macrophages, and neutrophils were significantly higher in macrophage-like VSMC-rich areas of AAA with ILT. Furthermore, we predicted IL-6 and IL-1β as feature genes which displayed a positive correlation with neutrophil activation. Further, through in vitro assays, we showed that neutrophil extracellular traps (NETs) induce the phenotypic switching of VSMCs through the NF-κB signaling pathway. This study, based on cutting-edge GeoMx Digital Spatial Profiling technology, systematically revealed the cellular and molecular mechanisms underlying the phenotypic switching of VSMCs into macrophage-like cells in AAA associated with ILT. This discovery provides a novel cellular biology perspective for understanding the destructive role of ILT.

Data availability

The data that support the findings of this study are available from the corresponding author (Chao Song; email: chao.song@vip.163.com) upon reasonable request. The spatial transcriptomic datasets are available in the Genome Sequence Archive (GSA) repository under accession number HRA017020.

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Acknowledgements

We thank Jiaqian Wang from JMDNA Bio-Medical Technology Co., Ltd. (Shanghai) for the support of GeoMx Digital Spatial Profiler study.

Funding

This work was supported by the Young Scientists Fund of the National Natural Science Foundation of China (Grant No. 82100456 and No. 82400164).

Author information

Author notes
  1. These authors contributed equally to this work: Xiaoying Ma and Bowen Liang.

Authors and Affiliations

  1. Department of Vascular Surgery, Changhai Hospital, 168 Changhai Road, Yangpu District, Shanghai, 200433, China

    Xiaoying Ma, Bowen Liang, Qingsheng Lu & Chao Song

  2. Hepatobiliary Surgery Center, Tongji Hospital, School of Medicine, Tongji University, Shanghai, China

    Xiaoying Ma

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  2. Bowen Liang
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Contributions

XYM and BWL performed the experiments. XYM analyzed data and prepared figures and draft. CS designed/supervised the study and collected clinical samples. XYM and CS applied for the funding. CS and QSL reviewed the manuscript. All the authors approved the submission and publication of the manuscript.

Corresponding author

Correspondence to Chao Song.

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The authors declare no competing interests.

Ethics approval and consent to participate

Clinical samples were collected with ethical approval from the research ethics committee of Shanghai Changhai Hospital (approval no: CHEC2022-052). Informed consent was obtained from all subjects and/or their legal guardian(s).

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Ma, X., Liang, B., Lu, Q. et al. Molecular and spatial heterogeneity of macrophage like vascular smooth muscle cells in abdominal aortic aneurysms associated with intraluminal thrombus. Sci Rep (2026). https://doi.org/10.1038/s41598-026-43807-y

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  • Received: 24 November 2025

  • Accepted: 06 March 2026

  • Published: 16 March 2026

  • DOI: https://doi.org/10.1038/s41598-026-43807-y

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Keywords

  • Abdominal aortic aneurysm
  • Intraluminal thrombus
  • Digital Spatial Profiler
  • Macrophage-like VSMC
  • Inflammatory response
  • Neutrophil activation
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