Abstract
Type 2 diabetes mellitus (T2DM) is a major risk factor for metabolic dysfunction-associated steatotic liver disease (MASLD), and their convergence presents a significant therapeutic challenge. Palmatine, an isoquinoline alkaloid with lipid-regulating and anti-inflammatory properties, is a promising candidate; however, its multi-target mechanisms remain undefined. To address this, we employed a sequential, multi-omics bioinformatics workflow to generate a testable mechanistic hypothesis, followed by rigorous experimental validation. First, integrative analyses—including target prediction, differential gene expression, pathway enrichment, and machine learning—converged to identify five core targets: ADRB2, BCL3, EGR1, FOS, and MAP3K8. Molecular docking predicted strong binding, and single-cell sequencing contextualized their expression within specific hepatic cell types. To experimentally test this predictive framework, we evaluated palmatine in a rat model of T2DM-associated MASLD. Palmatine treatment significantly improved liver function(reduced ALT, AST), attenuated inflammation (lowered TNF-α, IL-6) and oxidative stress (increased SOD, GSH; decreased MDA), ameliorated glycolipid metabolism (reduced TC, TG, LDL-C, and GLU), and reduced hepatic steatosis and fibrosis. Mechanistically, confirming the bioinformatic prediction, palmatine downregulated the expression of the five key targets and concurrently suppressed the activation of critical apoptotic executers (Caspase-3, Caspase-8, GSDME). These findings demonstrate that palmatine alleviates MASLD by modulating a novel target network to inhibit hepatocyte apoptosis, providing a robust, hypothesis-driven preclinical foundation for its therapeutic development.
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Data availability
Data will be available upon request from the corresponding author.
Abbreviations
- ACSL1:
-
Acyl-CoA Synthetase Long-Chain Family Member 1
- ADRB2:
-
Adrenoceptor Beta 2
- AKT:
-
AKT Serine/Threonine Kinase
- ALT:
-
Alanine Aminotransferase
- AMPK:
-
Liver Adenosine Monophosphate-Activated Protein Kinase
- ASK1:
-
Apoptosis Signal-regulating Kinase 1
- AST:
-
Aspartate Aminotransferase
- ATF4:
-
Activating Transcription Factor 4
- BCA:
-
Bicinchoninic Acid Assay
- BCL3:
-
BCL3 Transcription Coactivator
- BSA:
-
Bovine Serum Albumin
- BP:
-
BiologicalProcess
- β-arrestin2:
-
Beta-Arrestin 2
- CC:
-
CellularComponent
- cAMP:
-
Cyclic Adenosine Monophosphate
- CDS:
-
CellDynamicSimulation
- C/EBP-α:
-
CCAAT/Enhancer-Binding Protein Alpha
- cGAS-STING:
-
cyclic GMP-AMP synthase-stimulator of interferon genes
- DAMPs:
-
Damage-Associated Molecular Patterns
- DAPI:
-
4’6-Diamidino-2-phenylindole
- DEGs:
-
Differentially Expressed Genes
- DNL:
-
De Novo Lipogenesis
- DT:
-
Decision Tree
- ECL:
-
Enhanced Chemiluminescence
- EGR1:
-
Early Growth Response 1
- eIF2α:
-
eukaryotic Initiation Factor 2 alpha
- ERK:
-
Extracellular Signal-Regulated Kinase
- FADD:
-
Fas Associated Via Death Domain
- FBG:
-
Fasting Blood Glucose
- FFA:
-
Free Fatty Acids
- FAS:
-
FAS Cell Surface Death Receptor
- FOS:
-
AP-1 Transcription Factor Subunit
- FXR:
-
Farnesoid X Receptor Agonist
- GF-β1:
-
Transforming Growth Factor-beta 1
- GBM:
-
GradientBoostingMachine
- GEO:
-
Gene Expression Omnibus Database
- Gi:
-
G inhibitory protein
- GLM:
-
GeneralizedLinearModel
- GLP-1:
-
Glucagon-Like Peptide-1 Receptor Agonist
- GLU:
-
Glucose
- GSDME:
-
Gasdermin E
- GSH:
-
glutathione
- GO:
-
Gene Ontology
- HMGB1:
-
High Mobility Group Box 1
- HE:
-
Hematoxylin and Eosin Staining
- HepG2:
-
Hepatoma Cell Line G2
- HSCs:
-
Hepatic Stellate Cells
- HRP:
-
Horseradish Peroxidase
- IGT:
-
Impaired Glucose Tolerance
- IL-1β:
-
Interleukin-1 Beta
- IL-6:
-
Interleukin-6
- IF:
-
Immunofluorescence Staining
- IR:
-
Insulin Resistance
- JNK:
-
c-Jun N-terminal Kinase
- KEGG:
-
Kyoto Encyclopedia of Genes and Genomes
- KNN:
-
K-NearestNeighbors
- LASSO:
-
LeastAbsoluteShrinkageandSelectionOperator
- LDL-C:
-
Low-Density Lipoprotein Cholesterol
- mTOR:
-
Mechanistic Target of Rapamycin
- mTORC1:
-
Mechanistic Target of Rapamycin Complex 1
- MAP3K8:
-
Mitogen-Activated Protein Kinase Kinase Kinase 8
- MDA:
-
Malondialdehyde
- MF:
-
MolecularFunction
- MyD88:
-
Myeloid Differentiation Primary Response 88
- NAFLD:
-
Non-Alcoholic Fatty Liver Disease
- MASLD:
-
Metabolic dysfunction-associated steatotic liver disease
- NASH:
-
Non-Alcoholic Steatohepatitis
- NF-κB:
-
Nuclear Factor kappa-light-chain-enhancer of activated B cells
- NLRP3:
-
NACHT LRR and PYD domains-containing protein 3
- NNET:
-
NeuralNetwork
- OTCC:
-
Optimal Temperature Cutting Compound
- Pal:
-
palmatine
- PERK:
-
PKR-like Endoplasmic Reticulum Kinase
- PI3K:
-
Phosphatidylinositol 3-Kinase
- PBS:
-
Phosphate Buffered Saline
- PKA:
-
cAMP-dependent Protein Kinase
- PDE4:
-
Phosphodiesterase 4
- PPAR-γ:
-
Peroxisome Proliferator-Activated Receptor Gamma
- PUMA:
-
p53 Upregulated Modulator of Apoptosis
- PVDF:
-
Polyvinylidene Fluoride
- RIPA:
-
Radioimmunoprecipitation Assay Buffer
- ROC:
-
Receiver Operating Characteristic Curve
- RF:
-
RandomForest
- SOD:
-
Superoxide Dismutase
- Sem:
-
Semaglutide
- Smad3:
-
Mothers Against Decapentaplegic Homolog 3
- SREBP-1c:
-
Sterol Regulatory Element-Binding Protein 1c
- STZ:
-
Streptozotocin
- ssGSEA:
-
Single-Sample Gene Set Enrichment Analysis
- SVM:
-
SupportVectorMachine
- TBA:
-
Total Bile Acids
- T-C:
-
Total Cholesterol
- TAK1:
-
TGF-β-Activated Kinase 1
- T-G:
-
Triglycerides
- TLR4:
-
Toll-Like Receptor 4
- TNF-α:
-
Tumor Necrosis Factor Alpha
- T2DM:
-
Type 2 Diabetes Mellitus
- WB:
-
Western Blot
- XGB:
-
eXtremeGradientBoosting
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The author(s) declare that financial support was received for the research, authorship, and/or publication of this article. This research was funded by the National Natural Science Foundation of China (grant numbers 81873231 and 82474381).
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Huasen Yang: Writing–original draft, Formal analysis, Visualization. Zhoujing Shi: Software, Validation. Yazhi Qi: Investigation, Validation. Shuchang Bao: Investigation, Validation. Chaochong Li: Software, Conceptualization. Junhui Mei: Software, Conceptualization. Mingshuang Sun: Software, Conceptualization. Yusheng Han: Supervision, Writing–review and editing. Boyan Ma: Funding acquisition, Project administration. All authors have read and agreed to the published version of the manuscript.
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This study is reported in accordance with the ARRIVE guidelines and was approved by the Ethics Committee of Heilongjiang University of Traditional Chinese Medicine (Institutional Animal Use License: SYXK-2020-004; ethical approval number: 2023113008).
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Intravenous injection of Zoletil™50, followed by cervical dislocation to induce death after anesthesia.
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Yang, H., Shi, Z., Qi, Y. et al. Palmatine ameliorates MASLD in type 2 diabetes by modulating hepatic apoptosis and inflammation. Sci Rep (2026). https://doi.org/10.1038/s41598-026-45476-3
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DOI: https://doi.org/10.1038/s41598-026-45476-3


