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Understanding how mobility and spatial disparities shape COVID-19 transmission under rotational and localized lockdowns
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  • Published: 28 April 2026

Understanding how mobility and spatial disparities shape COVID-19 transmission under rotational and localized lockdowns

  • Mauricio Santos-Vega1,2 na1,
  • Jaime Cascante Vega3 na1,
  • Felipe Aramburo Jaramillo2,
  • Catalina González-Uribe4 &
  • …
  • Juan Manuel Cordovez2,5 

Scientific Reports (2026) Cite this article

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We are providing an unedited version of this manuscript to give early access to its findings. Before final publication, the manuscript will undergo further editing. Please note there may be errors present which affect the content, and all legal disclaimers apply.

Subjects

  • Diseases
  • Health care
  • Mathematics and computing
  • Medical research

Abstract

Non-pharmaceutical interventions (NPIs) such as city-level curfews and local lockdowns were implemented to control SARS-CoV-2 transmission, yet their effectiveness at fine spatial scales remains uncertain. We evaluated a rotational lockdown policy in Bogotá, Colombia, applied at the locality level—an administrative aggregation of neighborhoods. Mobility patterns derived from mobile phone data were analyzed to quantify commuting changes, defined as relative variations in movement compared to a pre-intervention baseline (one month before restrictions). We distinguished between external mobility (between localities) and internal mobility (within localities). Using epidemiological surveillance data, we estimated the effective reproductive number (\(\:{R}_{eff}\)) and assessed its association with mobility reductions. A compartmental transmission model simulated counterfactual epidemic trajectories without NPIs, comparing predicted and observed infections, mortality, and \(\:{R}_{eff}\). The intervention reduced inter-locality mobility by up to 40% but only minimally affected within-locality movement (median change < 5%), a descriptive result based on mobility data. Early lockdown cycles produced the largest declines in transmission (up to 27% reduction in cases), while subsequent rounds showed diminishing effects. Socioeconomic heterogeneity explained substantial spatial variability in transmission dynamics, revealing stronger associations between mobility and \(\:{R}_{eff}\) in localities with lower socioeconomic status. Our findings demonstrate that fine-scale NPIs can transiently reduce community transmission, but their impact depends on the spatial distribution of mobility and socioeconomic inequalities across the urban landscape.

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Acknowledgements

We thank the Instituto Nacional de Salud for providing the COVID-19 incidence data. We also thank Alejandro Feged and Felipe Gonzalez for providing the mobility data used in the analysis.

Funding

This study was supported by the project “A mixed-methods study on the design of AI and data science-based strategies to inform public health responses to COVID-19 in different local health ecosystems within Colombia (COLEV)”, funded by the International Development Research Centre (IDRC) and the Swedish International Development Cooperation Agency (SIDA) [Grant No. 109582].

Author information

Author notes
  1. Mauricio Santos-Vega and Jaime Cascante Vega contributed equally to this work.

Authors and Affiliations

  1. Departamento de Ciencias Biológicas, Universidad de los Andes, COL, Bogotá, D.C, USA

    Mauricio Santos-Vega

  2. Grupo de Biología y Matemática Computacional (BIOMAC), Departamento de Ingeniería Biomédica, Universidad de los Andes, Bogotá, D.C, USA

    Mauricio Santos-Vega, Felipe Aramburo Jaramillo & Juan Manuel Cordovez

  3. Center for Genomics & Systems Biology (CGSB), Department of Biology, New York University, New York, USA

    Jaime Cascante Vega

  4. Centro de los Objetivos de Desarrollo Sostenible para América Latina y el Caribe, Universidad de los Andes, Bogotá, D.C, USA

    Catalina González-Uribe

  5. Departamento de Ingeniería Biomédica, Universidad de los Andes, Bogotá, D.C, USA

    Juan Manuel Cordovez

Authors
  1. Mauricio Santos-Vega
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  2. Jaime Cascante Vega
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  3. Felipe Aramburo Jaramillo
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  4. Catalina González-Uribe
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  5. Juan Manuel Cordovez
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Corresponding authors

Correspondence to Mauricio Santos-Vega or Jaime Cascante Vega.

Ethics declarations

Competing interests

The authors declare no competing interests.

Ethics declarations

All data used in this study are publicly available, anonymized datasets provided by the Instituto Nacional de Salud (INS) of Colombia. No personal or identifiable information was accessed, processed, or stored at any stage of the analysis.

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Cite this article

Santos-Vega, M., Vega, J.C., Jaramillo, F.A. et al. Understanding how mobility and spatial disparities shape COVID-19 transmission under rotational and localized lockdowns. Sci Rep (2026). https://doi.org/10.1038/s41598-026-46616-5

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  • Received: 04 November 2025

  • Accepted: 26 March 2026

  • Published: 28 April 2026

  • DOI: https://doi.org/10.1038/s41598-026-46616-5

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