Table 3 Oligonucleotide sequences used in the study

From: Structures of Helicobacter pylori C-terminal protease CtpA reveal a new mode of self-contained proteolytic processing

Primer name

Sequence (5’-3’)

CtpA-F

GGGAATTCCATATGTTCAGTCGTTTCTCTAATGT

CtpA-R

CCCAAGCTTTTATTTCTTCTTAGGCGC

CtpA K325A/Q329A-F

GGTGAAAAAACCTTTGGTGCGGGAAGCGTGGCGATGCTACTCCCTGTCAAT

CtpA K325A/Q329A-R

ATTGACAGGGAGTAGCATCGCCACGCTTCCCGCACCAAAGGTTTTTTCACC

CtpA H85A-F

TCTAATTTGGATGCGGCTTCAGCGTATTTGAAT

CtpA H85A-R

ATTCAAATACGCTGAAGCCGCATCCAAATTAGA

CtpA F105R-F

CAAACCGAGGGCGAAAGAGGGGGGCTTGGGATC

CtpA F105R-R

GATCCCAAGCCCCCCTCTTTCGCCCTCGGTTTG

CtpA R162A-F

GCGATCAATCTCATGGCCGGCAAGCCAAAGACC

CtpA R162A-R

GGTCTTTGGCTTGCCGGCCATGAGATTGATCGC

CtpA S300A-F

GTCAATGGCGGTTCAGCGGCCGCGAGCGAGATCGTCGCA

CtpA S300A-R

TGCGACGATCTCGCTCGCGGCCGCTGAACCGCCATTGAC

CtpA K325A-F

GGTGAAAAAACCTTTGGTGCGGGAAGCGTGCAGATGCTA

CtpA K325A-R

TAGCATCTGCACGCTTCCCGCACCAAAGGTTTTTTCACC

CtpA Q329A-F

TTTGGTAAGGGAAGCGTGGCGATGCTACTCCCTGTCAAT

CtpA Q329A-R

ATTGACAGGGAGTAGCATCGCCACGCTTCCCTTACCAAA

CtpA E382A-F

AAATTCAGCTTGAAAGCAGCGGATCTAAAACAC

CtpA E382A-R

GTGTTTTAGATCCGCTGCTTTCAAGCTGAATTT

CtpA E382R-F

AAATTCAGCTTGAAACGAGCGGATCTAAAACAC

CtpA E382R-R

GTGTTTTAGATCCGCTCGTTTCAAGCTGAATTT