Table 1 Statistics of the genome assembly for P. sarmentosum
Feature | Value |
|---|---|
Genome size, estimated (Mb) | 526.56 |
Genome size, assembled (Mb) | 548.45 |
Hi-C reads (GB) | 50.12 |
CCS reads (Gb) | 123.52 |
Contig N50 (Mb) | 7.39 |
Scaffold N50 (Mb) | 22.52 |
Contigs | 674 |
Scaffolds | 138 |
Largest contig (Mb) | 38.88 |
GC content (%) | 34.49% |
HiFi reads mapping ratio (%) | 99.99% |
BUSCO assembly completeness (%) | 97.40% |
QV | 61.40 |
Anchoring percentage (%) | 97.79% |
Gaps number | 102 |
Gaps Length (kb) | 10.20 |
LAI core | 12.68 |
BUSCO predicted gene completeness (%) | 98. 6% |
Protein-coding genes | 39,154 |
rRNA genes | 1081 |
tRNA genes | 1138 |
snRNA genes | 846 |
snoRNA genes | 1138 |
miRNA genes | 175 |
