Table 1 Primers used for qPCR analysis of gene expression

From: The core clock transcription factor TOC1 binds directly to defence gene promoters regulating immunity in Arabidopsis

Gene

AGI

Primer sequences

Conc (nM)

Amplicon (bp)

Actin-2

AT3G18780

AGTGGTCGTACAACCGGTATTGT

900

138

  

CATGAGGTAATCAGTAAGGTCACGT

300

 

EIL1

AT2G27050

GTAAGCCTGTGACTGGTGCT

300

170

  

CTGAAGCGTATGCGGTGTTG

300

 

EIN3

AT3G20770

TAACAGTAGCGGCAACAGGTTC

300

135

  

TCTTGCTGCTTCTGCTGCATTC

300

 

ERF4

AT3G15210

GACTCTGATTCGTCATCGGTCG

400

103

  

AGGCCTGTTCCGATGGAGG

400

 

MON1

AT2G28390

CAGACAAGGCGATGGCGATA

200

244

  

GCTTTCTCTCAAGGGTTTCTGGGT

200

 

ORA47

AT1G74930

TTTGATTCCTTCTCCGACGACTTC

500

100

  

CATCTAATAAACTCTCTCCTCCGTAATC

500

 

ORA59

AT1G06160

ACATCTTCTCCTTCTTCCTCC

400

98

  

TCTTGCGTCATAACAACACTCTG

400

 

WRKY33

AT2G38470

ACAAAACATGAATGGTTCTGC

500

196

  

AGAGGAGGAGACAAAAGCA

500

 
  1. The annealing temperature used for all primer pairs was 60 °C.