Table 2 Number of unique self interactions (SIs) and protein–protein interactions (PPIs) identified with MS Annika and validated with xiFDR24 for 1% PPI FDR across the three replicates

From: Proteome-wide non-cleavable crosslink identification with MS Annika 3.0 reveals the structure of the C. elegans Box C/D complex

Replicate

Interactions (total)

SIs (intra)

PPIs (inter)

S1

137

108

29

S2

182

149

33

S3

146

115

31

S1 & S2 & S3

244

192

52