Extended Data Fig. 1: CD4+ T cell epitope prediction by ImmuScope.
From: Self-iterative multiple-instance learning enables the prediction of CD4+ T cell immunogenic epitopes
a, Bar plots of AUCs at different HLA loci (HLA-DP, HLA-DQ and HLA-DR), the points represent the average AUC of the corresponding MHC molecule. b, Bar plot of AUCs on the CD4+ epitope benchmark. In a, b, the bars represent the mean AUCs by 1,000 bootstrap iterations, the error bars indicate the 95% CIs, and each data point represents the performance of the corresponding HLA loci. c, Comparison of AUC performance between ImmuScope and other methods on the CD4+ epitope benchmark across different peptide lengths. Shaded bands around the lines represent 95% CIs, estimated from 1,000 bootstrap iterations and scaled by a factor of 0.2 for visual clarity.
