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The association of specific immune cell types with SARS-CoV-2 severity is not fully understood. Here the authors analyse PBMC from individuals recovered from COVID-19 and propose immune cell signatures post recovery that are associated with disease severity.

Chinese government has implemented regulations to reduce mining-related methane emission since 2010. Here the authors estimated methane emissions in China using GOSAT satellite observation and results reveal a business-as-usual increase in methane emissions since 2010 despite those ambitious targets.

Data on GHG emissions from the food system are mostly scattered across sectors and remain unavailable in many countries. EDGAR-FOOD, a globally consistent food emission database, brings together emissions from food-related land use and land-use change, production, processing, distribution, consumption and residues over 1990–2015 at country level.

Perturbed B cell responses have been associated with Crohn’s disease. Here, the authors sequence the B cell receptor repertoire in patients with Crohn’s disease and identify shared B cell clones, thus implicating the presence of common Crohn’s disease-associated antigens driving a pathogenic B cell response.

The SARS-CoV-2 spike glycoprotein is flexible, and its receptor-binding domain (RBD) fluctuates between open and closed conformations. Disulfide bonds are engineered into the spike ectodomain to lock the RBD in the closed state, leading to a construct with high thermostability.

Individuals over eighty years of age are less likely to mount a good immune response against SARS-CoV-2 (measured by neutralization titres) after the first dose of the BNT162b2 mRNA vaccine, but achieve good neutralization after the second dose.

Wetlands dominate methane emissions in Amazonia, with the largest emissions in the east but no discernible temporal trend, according to nine years of atmospheric methane observations across Amazonia.

Smith and colleagues find that a multivariate signature of unresolved inflammation and altered iron homeostasis detected beyond 2 weeks following acute COVID-19 onset was the strongest early differentiator of those who report long COVID symptoms at 3–10 months.

Transcriptomic and proteomic profiling of blood samples from individuals with COVID-19 reveals immune cell and hematopoietic progenitor cell alterations that are differentially associated with disease severity.

Remdesivir is under evaluation for treatment of COVID-19 in clinical trials. Here, the authors report results of remdesivir treatment in a patient with COVID-19 and the genetic antibody deficiency XLA. They show a temporally correlated clinical and virological response, suggesting that remdesivir can reduce SARS-CoV-2 replication in patients.

Plasmodium falciparum secretes extracellular vesicles (EVs) while growing inside red blood cells (RBCs). Here the authors show that these EVs contain assembled and functional 20S proteasome complexes that remodel the cytoskeleton of naïve human RBCs, priming the RBCs for parasite invasion.

This study presents OncoTreat, a framework for the prioritization of compounds targeting mechanistic tumor dependencies in individual patients.

The internal amplification of Low-Gain Avalanche Diode sensors can enhance the signal-to-noise ratio, improving the detection of low-energy X-rays. In this work, the authors demonstrate a single photon counting hybrid pixel detector detecting X-ray energies down to 550 eV, and test it in ptychographic imaging at the Fe L₃-edge.

B cell development and selection occur in the often hypoxic environment of the bone marrow. Burrows and colleagues demonstrate that dynamic regulation of B cell–intrinsic hypoxia-inducible factor-1α is essential for normal B cell development and function.

Chronic infection with SARS-CoV-2 leads to the emergence of viral variants that show reduced susceptibility to neutralizing antibodies in an immunosuppressed individual treated with convalescent plasma.

A study of SARS-CoV-2 variants examining their transmission, infectivity, and potential resistance to therapies provides insights into the biology of the Delta variant and its role in the global pandemic.

Sera from vaccinated individuals and some monoclonal antibodies show a modest reduction in neutralizing activity against the B.1.1.7 variant of SARS-CoV-2; but the E484K substitution leads to a considerable loss of neutralizing activity.

Here the authors probe the cleavage and gate opening of single-stranded DNA by the human topoisomerase TRR using a unique single-molecule strategy to reveal structural plasticity in response to both double-stranded DNA and the helicase BLM.

Although conventional IBD surgery can be performed using a minimally invasive approach, controversy surrounds the role of laparoscopy in the surgical management of IBD. The authors of this Review consider the current position of laparoscopy in the surgical management of IBD, the short-term and long-term results achieved using this approach, and the supposed benefits and difficulties associated with such minimally invasive surgery.

The short-term safety and efficacy of IFN-β in patients with multiple sclerosis are well established, but less is known about this drug when taken over years and decades. Sormani and Bruzzi discuss the difficulties associated with designing studies of the long-term treatment effects of IFN-β. They then present techniques that have been employed to minimize potential sources of bias. The authors conclude that long-term use of IFN-β reduces clinical progression, but important questions relating to mortality warrant further investigation.

This review examines whether the ASPP family of p53-interacting proteins are a missing link in the regulation of p53-induced cell-cycle arrest and apoptosis.

Methane is an important greenhouse gas, responsible for about 20% of the warming induced by long-lived greenhouse gases since pre-industrial times. A compilation of observations and results from chemical transport, ecosystem and climate chemistry models suggests that a rise in wetland and fossil fuel emissions probably accounts for the renewed increase in global methane levels after 2006.

Ruffieux, Hess and colleagues analyze longitudinal phenotyping of patients with coronavirus disease 2019 to show that covariation of innate immune cell numbers, kynurenine metabolites and lipid metabolites influence the restoration of homeostasis, the risk of death and that of long COVID.

A process-based carbon isotope biogeochemistry model substantially reduces uncertainty in regional and global estimates of the stable carbon isotopic composition of methane emissions from wetlands and suggests rising atmospheric concentrations are due to increased microbial emissions.

Anemia is the most prevalent extraintestinal complication of IBD—it affects both quality of life and ability to work. Although the causes of anemia in IBD are multifactorial, iron deficiency anemia is the most common. In this Review, the authors provide an overview of iron homeostasis in health before discussing diagnostic and therapeutic strategies for iron deficiency anemia in patients with IBD.