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Showing 151–200 of 418 results
Advanced filters: Author: Allen P. Liu Clear advanced filters
  • Developing a stable metallic lithium anode is necessary for next-generation batteries; however, lithium is prone to corrosion, a process that must be better understood if practical devices are to be created. A Kirkendall-type mechanism of lithium corrosion has now been observed. The corrosion is fast and is governed by a galvanic process.

    • Dingchang Lin
    • Yayuan Liu
    • Yi Cui
    Research
    Nature Chemistry
    Volume: 11, P: 382-389
  • Cancer cells are metabolically adaptable and the identification of specific vulnerabilities is challenging. Here the authors identify a subset of neuroendocrine cell lines exquisitely sensitive to inhibition of SQLE, an enzyme in the cholesterol biosynthetic pathway, due to the toxic accumulation of pathway intermediate squalene.

    • Christopher E. Mahoney
    • David Pirman
    • Gromoslaw A. Smolen
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-14
  • Adult forms of inflammatory bowel disease (IBD) are of a polygenic nature, but paediatric and very early onset (VEO) IBD also occur as monogenic forms. Here, using whole exome sequencing, the authors explore both the monogenic and polygenic contribution to VEO-IBD and characterize a rare somatic mosaic VEO-IBD patient.

    • Eva Gonçalves Serra
    • Tobias Schwerd
    • Carl A. Anderson
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-15
  • Here Ramanan and colleagues provide an analysis of mammary T cells during late pregnancy and lactation. This revealed an increase in intraepithelial lymphocytes in the lactating mammary gland, which was driven by thymic and intestinal inputs and was sensitive to changes in the microbiota

    • Abigail Jaquish
    • Eleni Phung
    • Deepshika Ramanan
    Research
    Nature Immunology
    Volume: 26, P: 1411-1422
  • Single-cell whole-genome sequencing shows that 'foreground' cell-to-cell structural variation and alterations in copy number are associated with genomic diversity and evolution in triple-negative breast and high-grade serous ovarian cancers.

    • Tyler Funnell
    • Ciara H. O’Flanagan
    • Samuel Aparicio
    ResearchOpen Access
    Nature
    Volume: 612, P: 106-115
  • The AR-V7 isoform is associated with anti-androgen drug resistance in prostate cancer. Here, the authors show that AR-V7 protein stability is regulated by HSP70/STUB1 complex-mediated proteostasis which confers drug resistance in late stage prostate cancer. Inhibition of HSP70 re-sensitizes resistant cells to enzalutamide therapy.

    • Chengfei Liu
    • Wei Lou
    • Allen C. Gao
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-16
  • Reconstructing the full shape of neurons is a major informatics challenge as it requires handling huge whole-brain imaging datasets. Here the authors present an open-source virtual reality annotation system for precise and efficient data production of neuronal shapes reconstructed from whole brains.

    • Yimin Wang
    • Qi Li
    • Hanchuan Peng
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-9
  • Genetic and protein expression analyses of serially collected tumor biopsies from a patient with melanoma treated with immune checkpoint inhibitors provide insights into tumor microenvironment changes that occur during treatment resistance.

    • David Liu
    • Jia-Ren Lin
    • Genevieve M. Boland
    Research
    Nature Medicine
    Volume: 27, P: 985-992
  • Microbial carbon use efficiency has an important role in soil C cycling. Here the authors test the interactive effects of temperature and moisture and manipulate microbial community composition in soil microcosms, showing a positive relationship between microbial diversity and CUE that is contingent on abiotic conditions.

    • Luiz A. Domeignoz-Horta
    • Grace Pold
    • Kristen M. DeAngelis
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-10
  • Integration and comparison of multiple single cell sequencing datasets can be used to compare different studies. Here the authors propose MetaTiME which compares the gene expression of single cells from the tumour microenvironment across different tumours and uses transportable labels and metacomponents to annotate cell types and states.

    • Yi Zhang
    • Guanjue Xiang
    • Clifford A. Meyer
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-12
  • The Human Microbiome Project Consortium has established a population-scale framework to study a variety of microbial communities that exist throughout the human body, enabling the generation of a range of quality-controlled data as well as community resources.

    • Barbara A. Methé
    • Karen E. Nelson
    • Owen White
    ResearchOpen Access
    Nature
    Volume: 486, P: 215-221
  • Neuroendocrine carcinomas (NECs) arise from different anatomic sites, but have similar histological and clinical features. Here, the authors show that the epigenetic landscape of a range of NECs converges towards a common epigenetic state, while distinct subtypes occur within neuroendocrine prostate cancer contributing to intratumor heterogeneity in clinical samples.

    • Paloma Cejas
    • Yingtian Xie
    • Henry W. Long
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-11
  • Virus-specific CD8+ T cells are crucial during H7N9 influenza infection, but CD8+ T cell dysfunction is associated with poor prognosis. Here, the authors use molecular and phenotypic analysis to establish persistence of clonally diverse CD8+ T cell populations during fatal infection.

    • Zhongfang Wang
    • Lingyan Zhu
    • Katherine Kedzierska
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-12
  • Viral infection of the respiratory system induces exuberant fibroblast activity, resulting in extensive remodelling of the extracellular matrix and cytokine release, which promote immune cell infiltration of the affected area at the expense of respiratory function.

    • David F. Boyd
    • E. Kaitlynn Allen
    • Paul G. Thomas
    Research
    Nature
    Volume: 587, P: 466-471
  • A large-scale genomics study shows that the cell of origin and founding mutations determine disease subtype and lead to the expression of multiple haematopoietic lineage-defining antigens in mixed phenotype acute leukaemia.

    • Thomas B. Alexander
    • Zhaohui Gu
    • Charles G. Mullighan
    Research
    Nature
    Volume: 562, P: 373-379
  • Bifacial solar cells can outperform monofacial cells by exploiting sunlight reflected off the ground surface. De Bastiani et al. show that bifacial perovskite/silicon tandem with an optimized bandgap can deliver a power density of 26 mW cm–2 and compare its performance to monofacial cells under outdoor conditions.

    • Michele De Bastiani
    • Alessandro J. Mirabelli
    • Stefaan De Wolf
    Research
    Nature Energy
    Volume: 6, P: 167-175
  • Resistance to first line treatment is a major hurdle in cancer treatment, that can be overcome with drug combinations. Here, the authors provide a large drug combination screen across cancer cell lines to benchmark crowdsourced methods and to computationally predict drug synergies.

    • Michael P. Menden
    • Dennis Wang
    • Julio Saez-Rodriguez
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-17
  • To date, the precise localisation of ligands and adhesion proteins are determined in two parallel characterization setups. Here, the authors report a self-assembled monolayer chemistry for indium tin oxide surfaces allowing single molecule localisation microscopy (SMLM) imaging of ligands and adhesion proteins in a single experiment.

    • Xun Lu
    • Philip R. Nicovich
    • J. Justin Gooding
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-10
  • Aldehydes are common intermediates in enzymatic pathways, but their high reactivity can make them difficult to observe. Here, the authors study the mechanism of aldehyde deactivation in a dehydrogenase, showing a key E/Zisomerization and observing a thiohemiacetal intermediate by crystal structure analysis.

    • Lu Huo
    • Ian Davis
    • Aimin Liu
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-10
  • Circulating tumor cells (CTCs) and cell-free DNA (cfDNA) enables characterization of a patient’s cancer. Here, the authors analyse CTCs, cfDNA, and tumor biopsies from multiple myeloma patients to show these approaches are complementary for mutation detection, together enabling a greater fraction of patient tumors to be profiled.

    • S. Manier
    • J. Park
    • I. M. Ghobrial
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-11
  • Accounting for subaqueous melting from lake-terminating glaciers increases estimated glacier mass loss across the Himalaya by 7% over the past 20 years, according to analysis of satellite observations and bathymetric measurements.

    • Guoqing Zhang
    • Tobias Bolch
    • Weicai Wang
    Research
    Nature Geoscience
    Volume: 16, P: 333-338
  • The authors present a public collection of 117 bacterial isolates from the pig gut, including the description of 38 novel taxa. Interesting functions discovered in these organisms include a new fucosyltransferease and sactipeptide-like molecules encoded by biosynthetic gene clusters.

    • David Wylensek
    • Thomas C. A. Hitch
    • Thomas Clavel
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-26
  • In this study, Massachusetts Consortium for Pathogen Readiness (MassCPR) investigators assess the relationship between SARS-CoV-2 viral load and COVID-19 disease severity and report that the levels of detectable viral RNA, especially in plasma, correlates with severity of respiratory disease, inflammatory markers and predicted risk of death.

    • Jesse Fajnzylber
    • James Regan
    • Alex Zhu
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-9
  • Radiation-induced high-grade gliomas (RIGs) are an incurable late complication of cranial radiation therapy. In the largest study to date, we report the results of DNA methylation profiling, RNA-Seq and genomic sequencing of 32 RIG tumors, and an in vitro drug screen in two RIG cell lines.

    • John DeSisto
    • John T. Lucas Jr.
    • Adam L. Green
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-16
  • Mesenchymal stromal cells with their nuclei removed by density-gradient centrifugation and displaying chemoattractant receptors and endothelial-cell-binding molecules function as effective vehicles for the delivery of therapeutics to diseased tissue.

    • Huawei Wang
    • Christina N. Alarcón
    • Richard L. Klemke
    Research
    Nature Biomedical Engineering
    Volume: 6, P: 882-897
  • RETFound, a foundation model for retinal images that learns generalizable representations from unlabelled images, is trained on 1.6 million unlabelled images by self-supervised learning and then adapted to disease detection tasks with explicit labels.

    • Yukun Zhou
    • Mark A. Chia
    • Pearse A. Keane
    ResearchOpen Access
    Nature
    Volume: 622, P: 156-163
  • A unitary protocol for braiding projective non-Abelian Ising anyons in a generalized stabilizer code is implemented on a superconducting processor, allowing for verification of their fusion rules and realization of their exchange statistics.

    • T. I. Andersen
    • Y. D. Lensky
    • P. Roushan
    ResearchOpen Access
    Nature
    Volume: 618, P: 264-269
  • Methane emissions from aquatic systems contribute approximately half of global methane emissions, according to meta-analysis of natural, impacted and human-made aquatic ecosystems and indicating potential mitigation strategies to reduce emissions.

    • Judith A. Rosentreter
    • Alberto V. Borges
    • Bradley D. Eyre
    Research
    Nature Geoscience
    Volume: 14, P: 225-230
  • Optimizing an enzyme usually requires testing thousands of variants, thus consuming large amounts of material and time. Here, the authors present a method that allows for measuring two different activities of the same enzyme simultaneously instead of doing two consecutive rounds of screening.

    • Fuqiang Ma
    • Meng Ting Chung
    • Guang-Yu Yang
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-8
  • Manipulating liquids with tunable shape and optical functionalities in real time remains a great challenge. Here, the authors demonstrate electrotunable liquid sulfur microdroplets in an electrochemical cell and tune its characteristics in a fast, repeatable, and controlled manner.

    • Guangmin Zhou
    • Ankun Yang
    • Yi Cui
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-9
  • An international consortium reports the genomic sequence for ten Drosophila species, and compares them to two other previously published Drosophila species. These data are invaluable for drawing evolutionary conclusions across an entire phylogeny of species at once.

    • Andrew G. Clark
    • Michael B. Eisen
    • Iain MacCallum
    Research
    Nature
    Volume: 450, P: 203-218
  • This overview of the ENCODE project outlines the data accumulated so far, revealing that 80% of the human genome now has at least one biochemical function assigned to it; the newly identified functional elements should aid the interpretation of results of genome-wide association studies, as many correspond to sites of association with human disease.

    • Ian Dunham
    • Anshul Kundaje
    • Ewan Birney
    ResearchOpen Access
    Nature
    Volume: 489, P: 57-74
  • Figs and their wasp pollinators are a classic example of coevolution. By assembling and analysing genomes from across the Ficus clade, authors suggest that fig hybridization driven by pollinator host-switching in this obligate pollination system, is more common than previously thought.

    • Gang Wang
    • Xingtan Zhang
    • Jin Chen
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-14
  • The Human Microbiome Project Consortium reports the first results of their analysis of microbial communities from distinct, clinically relevant body habitats in a human cohort; the insights into the microbial communities of a healthy population lay foundations for future exploration of the epidemiology, ecology and translational applications of the human microbiome.

    • Curtis Huttenhower
    • Dirk Gevers
    • Owen White
    ResearchOpen Access
    Nature
    Volume: 486, P: 207-214
  • The impact of cisplatin-based chemotherapy on tumor genomes is complex. Here, the authors study matched pre- and post-chemotherapy primary samples in muscle-invasive bladder cancer, finding a cisplatin-based mutational signature, and highlighting the impact of intratumor heterogeneity on survival.

    • David Liu
    • Philip Abbosh
    • Eliezer M. Van Allen
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-11
  • Rivers are among the most diverse, dynamic, and productive ecosystems on Earth. Here, using Landsat imagery, the authors provide a global attribution of the recent changes in river regime to morphological dynamics, dam-induced widening, and hydrological signals.

    • Qianhan Wu
    • Linghong Ke
    • Chunqiao Song
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-13