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Showing 1–12 of 12 results
Advanced filters: Author: Lingjuan Xie Clear advanced filters
  • Crabgrasses (Digitaria spp.) are invasive upland weeds distributed globally. Here, the authors assemble a telomere-to-telomere reference genome of D. sanguinalis along with its diploid and tetraploid progenitors and reveal lineage-specific introgression of a herbicide resistance-associated gene through population genetics analyses.

    • Yujie Huang
    • Jian Li
    • Longjiang Fan
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-19
  • Comparative analyses of rice centromeres from 70 high-quality genomes of the Oryza AA group provide insights into rice centromere evolution and genetic factors that shape these genomic regions.

    • Lingjuan Xie
    • Yujie Huang
    • Dongya Wu
    Research
    Nature Genetics
    Volume: 57, P: 2808-2818
  • This study collected and analysed 3,517 de novo assemblies from 1,575 plant species sequenced since 2000, including 793 newly sequenced species in the past three years. A database named N3: plants, genomes, technologies was developed to accommodate the metadata associated with the sequenced genomes.

    • Lingjuan Xie
    • Xiaojiao Gong
    • Longjiang Fan
    Reviews
    Nature Plants
    Volume: 10, P: 551-566
  • Interest in using large language models such as ChatGPT has grown rapidly, but concerns about safe and responsible use have emerged, in part because adversarial prompts can bypass existing safeguards with so-called jailbreak attacks. Wu et al. build a dataset of various types of jailbreak attack prompt and demonstrate a simple but effective technique to counter these attacks by encapsulating users’ prompts in another standard prompt that reminds ChatGPT to respond responsibly.

    • Yueqi Xie
    • Jingwei Yi
    • Fangzhao Wu
    Research
    Nature Machine Intelligence
    Volume: 5, P: 1486-1496
  • Treg cells play a pivotal role in suppressing allograft rejection but their presence in tumours hamper antitumour immunity. Here authors show that T cells, in which Setdb1 is genomically deleted, give rise to Treg cells that prevent allograft rejection but don’t compromise the antitumour immune response.

    • Xiaosheng Tan
    • Xiangli Zhao
    • Peixiang Lan
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • Mainstream personalization methods rely on centralized Graph Neural Network learning on global graphs, which have considerable privacy risks due to the privacy-sensitive nature of user data. Here, the authors present a federated GNN framework for both effective and privacy-preserving personalization.

    • Chuhan Wu
    • Fangzhao Wu
    • Xing Xie
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-10
  • This work presents a communication-efficient federated learning method that saves a major fraction of communication cost. It reveals the advantage of reciprocal learning in machine knowledge transfer and the evolutional low-rank properties of deep model updates.

    • Chuhan Wu
    • Fangzhao Wu
    • Xing Xie
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-8
  • Echinochloa is an important genus in the grass family as many of them are either problematic weeds or domesticated millets. Here, the authors assemble three polyploidy genomes in this genus using the diploid-assisted scaffolding method DipHic and provide genomic insights into the dual roles of some species as weeds and orphan crops.

    • Dongya Wu
    • Enhui Shen
    • Chu-Yu Ye
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-16