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Showing 1–50 of 217 results
Advanced filters: Author: Cynthia D Branch Clear advanced filters
  • Indonesian cattle are unique due to their history of admixture involving both zebu and banteng. Here, Wang et al. identify ~3.5 million novel introgressed SNP variants and provide a genomic map of banteng introgression within and across many cattle breeds, each with unique introgression histories.

    • Xi Wang
    • Casia Nursyifa
    • Rasmus Heller
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-19
  • Phylogenomic analysis of 7,923 angiosperm species using a standardized set of 353 nuclear genes produced an angiosperm tree of life dated with 200 fossil calibrations, providing key insights into evolutionary relationships and diversification.

    • Alexandre R. Zuntini
    • Tom Carruthers
    • William J. Baker
    ResearchOpen Access
    Nature
    Volume: 629, P: 843-850
  • Complete sequences of chromosomes telomere-to-telomere from chimpanzee, bonobo, gorilla, Bornean orangutan, Sumatran orangutan and siamang provide a comprehensive and valuable resource for future evolutionary comparisons.

    • DongAhn Yoo
    • Arang Rhie
    • Evan E. Eichler
    ResearchOpen Access
    Nature
    Volume: 641, P: 401-418
  • Migrating cells tune their energy utilization in response to their microenvironment, but how cellular energetics direct navigation remains unclear. Here, the authors report that energetic costs for motility, regulated by cell mechanics and confinement, predict the probability of migration choice.

    • Matthew R. Zanotelli
    • Aniqua Rahman-Zaman
    • Cynthia A. Reinhart-King
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-12
  • A phase 1/2 trial of dual-vector rAAVrh8 gene therapy for GM2 gangliosidosis, administered by bilateral intrathalamic, cisterna magna and intrathecal delivery found a dose-dependent biochemical correction of the disease.

    • Florian Eichler
    • Oguz I. Cataltepe
    • Terence R. Flotte
    ResearchOpen Access
    Nature Medicine
    Volume: 31, P: 2927-2935
  • Evolutionary modelling and expert review are applied to integrate experimentally supported knowledge accumulated in the Gene Ontology knowledgebase to create a draft human gene ‘functionome’.

    • Marc Feuermann
    • Huaiyu Mi
    • Paul D. Thomas
    ResearchOpen Access
    Nature
    Volume: 640, P: 146-154
  • Federated learning (FL) algorithms have emerged as a promising solution to train models for healthcare imaging across institutions while preserving privacy. Here, the authors describe the Federated Tumor Segmentation (FeTS) challenge for the decentralised benchmarking of FL algorithms and evaluation of Healthcare AI algorithm generalizability in real-world cancer imaging datasets.

    • Maximilian Zenk
    • Ujjwal Baid
    • Spyridon Bakas
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-20
  • Here, the authors integrate a photonic crystal, supporting photonic bound states in the continuum (BICs), with monolayer WSe2, and leverage the high energy confinement of the BIC modes to demonstrate coherent directional dark exciton emission.

    • Xuezhi Ma
    • Kaushik Kudtarkar
    • Shoufeng Lan
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-9
  • The molecular etiology of hypertensive disorders of pregnancy is largely unknown. Here the authors show from a prospective study of diverse pregnancies that the disease can be split into molecular subtypes based on RNA data and validated a classifier for individuals with no preexisting high risk factors.

    • Michal A. Elovitz
    • Elaine P. S. Gee
    • Morten Rasmussen
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-14
  • The application of artificial intelligence for automated diagnosis of electrocardiograms can improve care in remote settings but is limited by the reliance on infrequently available signal-based data. Here, the authors report the development of a multi-label automated diagnosis model for electrocardiographic images.

    • Veer Sangha
    • Bobak J. Mortazavi
    • Rohan Khera
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-12
  • Using several complementary models, including human iPSC-derived trophoblasts, trophoblast organoids, and placenta explants, the authors find cytotrophoblasts and syncytiotrophoblasts to be susceptible to Oropouche virus (BeAn19991) infection.

    • Christina J. Megli
    • Rebecca K. Zack
    • Cynthia M. McMillen
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-10
  • Metabolic and alcohol-related liver disease presents challenges in clinical trials due to complex pathophysiology. This Review discusses noninvasive imaging, serum biomarkers and adaptive designs as modalities to enhance patient-centric end points, aiming to refine diagnostics and improve drug development.

    • Luis Antonio Diaz
    • Maja Thiele
    • Rohit Loomba
    Reviews
    Nature Reviews Gastroenterology & Hepatology
    P: 1-19
  • Genome-wide analyses identify 30 independent loci associated with obsessive–compulsive disorder, highlighting genetic overlap with other psychiatric disorders and implicating putative effector genes and cell types contributing to its etiology.

    • Nora I. Strom
    • Zachary F. Gerring
    • Manuel Mattheisen
    ResearchOpen Access
    Nature Genetics
    Volume: 57, P: 1389-1401
  • The SARS-CoV-2 virus has been documented to transmit between humans and animals, providing opportunities for viral reservoirs. Here, the authors show SARS-CoV-2 lineages in free-ranging white-tailed deer across the United States, long after the lineages had declined in human populations.

    • Aijing Feng
    • Sarah Bevins
    • Xiu-Feng Wan
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-17
  • Hematopoietic stem cells (HSCs) differentiate into multiple lineages, with such capacity impacted by aging. Here the authors identify Kitlo HSCs as a functionally distinct population that exhibits distinct lymphoid-primed chromatin landscapes, which drive enhanced lymphoid reconstitution capacity, and is altered in aged hosts.

    • Harold K. Elias
    • Sneha Mitra
    • Marcel R. M. van den Brink
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-20
  • Craniofacial malformations have been linked to congenital heart defects, as in 22q11.2 deletion syndrome, but the mechanisms linking these lineages remain unknown. Here they show that zebrafish nxk2.7 is expressed in cardiopharyngeal progenitors and has roles in craniofacial development that cannot be compensated for by nkx2.5.

    • Caitlin Ford
    • Carmen de Sena-Tomás
    • Kimara L. Targoff
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-19
  • Modelling of the evolution of atmospheric methane emissions from the 2022 Nord Stream subsea pipeline leaks shows that the event emitted the largest recorded amount of methane from a single transient event.

    • Stephen J. Harris
    • Stefan Schwietzke
    • Yuzhong Zhang
    ResearchOpen Access
    Nature
    Volume: 637, P: 1124-1130
  • The One Thousand Plant Transcriptomes Initiative provides a robust phylogenomic framework for examining green plant evolution that comprises the transcriptomes and genomes of diverse species of green plants.

    • James H. Leebens-Mack
    • Michael S. Barker
    • Gane Ka-Shu Wong
    ResearchOpen Access
    Nature
    Volume: 574, P: 679-685
  • A quantitative fluorescence-activated cell sorting method for generating fully human conformational antibodies against amyloid aggregates associated with neurodegenerative disorders—without the need for immunization—has now been developed. Engineered antibodies obtained using this approach show properties rivaling those of clinical-stage antibodies specific for tau and α-synuclein amyloid aggregates.

    • Alec A. Desai
    • Jennifer M. Zupancic
    • Peter M. Tessier
    Research
    Nature Chemical Biology
    Volume: 21, P: 916-925
  • Highly endangered species like the Sumatran rhinoceros are at risk from inbreeding. Five historical and 16 modern genomes from across the species range show mutational load, but little evidence for local adaptation, suggesting that future inbreeding depression could be mitigated by assisted gene flow among populations.

    • Johanna von Seth
    • Nicolas Dussex
    • Love Dalén
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-11
  • To role that carceral institutions play in Mycobacterium tuberculosis transmission remains somewhat unknown. Authors perform a prospective genomic surveillance study, to assess transmission dynamics in prisons and surrounding communities in Paraguay.

    • Gladys Estigarribia Sanabria
    • Guillermo Sequera
    • Katharine S. Walter
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-10
  • The genomic and epigenomic landscape during metastasis in osteosarcoma remains to be investigated. Here, functional and pharmacological studies identify the dynamic epigenomic changes and gene vulnerabilities during the formation of osteosarcoma tumours in the lung microenvironment.

    • W. Dean Pontius
    • Ellen S. Hong
    • Peter C. Scacheri
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-15
  • Liu and colleagues find differential effects of microglial apoE isoforms on brain function and microglial responses. ApoE3 enhances microglial responses, promoting brain function and reducing amyloid deposition and associated neurotoxicity, while the Alzheimer’s disease-associated apoE4 results in lipid droplet accumulation and impaired microglial responses, which are critical for limiting the development of amyloid pathology.

    • Chia-Chen Liu
    • Na Wang
    • Guojun Bu
    Research
    Nature Immunology
    Volume: 24, P: 1854-1866
  • The understanding of marine virus diversity and function is in its infancy. Here, Coutinhoet al. assemble a data set of new viral contigs and use co-occurrence analyses to identify the putative hosts, elucidate infection strategies and viral strategies for exploiting their hosts.

    • Felipe H. Coutinho
    • Cynthia B. Silveira
    • Fabiano L. Thompson
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-12
  • Brain myelinating oligodendrocytes are rare and difficult to isolate, which has limited data on their development. Here the authors develop a reporter for scalable purification of human pluripotent stem cell derived oligodendrocyte lineage cells, and use this to map differentiation using single cell RNA-sequencing,

    • Xitiz Chamling
    • Alyssa Kallman
    • Donald J. Zack
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-20
  • Metabolic reprogramming is crucial in tumorigenesis, with alterations in glucose and fatty acid metabolism playing key roles. Here, the authors show that inhibiting fatty acid oxidation in HER2-driven breast cancers delays tumor growth and enhances the effectiveness of HER2-targeted therapies.

    • Ipshita Nandi
    • Linjia Ji
    • William J. Muller
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-20
  • Cells trigger an unfolded protein response (UPR) in the endoplasmic reticulum, but its regulation by mitochondria is unclear. Here, the authors report a 54-residue microprotein PIGBOS that participates in inter-organelle contact between the endoplasmic reticulum and the mitochondria and may regulate UPR.

    • Qian Chu
    • Thomas F. Martinez
    • Alan Saghatelian
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-13
  • The genes EGLN1 and EPAS1 are candidates for high-altitude adaptations in Tibetan populations. Here, Jeong et al. demonstrate that the two genes show evidence of high-altitude ancestry in the Tibetan genome, suggesting the importance of population admixture for adaptation.

    • Choongwon Jeong
    • Gorka Alkorta-Aranburu
    • Anna Di Rienzo
    Research
    Nature Communications
    Volume: 5, P: 1-7
  • In the homologous recombination repair-deficient population of TALAPRO-2, a placebo-controlled phase 3 trial, treatment of patients with metastatic castration-resistant prostate cancer with the poly(ADP-ribose) polymerase inhibitor talazoparib plus enzalutamide led to prolonged progression-free survival compared with placebo plus enzalutamide.

    • Karim Fizazi
    • Arun A. Azad
    • Neeraj Agarwal
    ResearchOpen Access
    Nature Medicine
    Volume: 30, P: 257-264
  • Fibrotic scar tissue limits central nervous system regeneration. Here, Dias et al. show that fibrotic scarring is common in mice and humans, following distinct lesions to the adult brain and spinal cord, and derives from a discrete population of GLAST-expressing perivascular cells.

    • David O. Dias
    • Jannis Kalkitsas
    • Christian Göritz
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-24
  • Latin America and the Caribbean remain largely underrepresented in psychiatric genetics research. This Review highlights the need for more research in these populations to advance genetic insights and ensure equitable precision medicine access.

    • Estela M. Bruxel
    • Diego L. Rovaris
    • Janitza L. Montalvo-Ortiz
    Reviews
    Nature Genetics
    Volume: 57, P: 1074-1088
  • By day 1,041 after explosion, SN Ia-CSM 2018evt had produced an estimated 0.01 solar masses of dust in the cold, dense shell behind the supernova ejecta–circumstellar medium interaction, ranking it as one of the most prolific dust-producing supernovae ever recorded.

    • Lingzhi 灵芝 Wang王
    • Maokai Hu
    • Xinghan Zhang
    ResearchOpen Access
    Nature Astronomy
    Volume: 8, P: 504-519
  • An analysis of human chromosome 15 — which is altered in Prader-Willi and Angelman syndromes — reveals that it resembles a hall of mirrors, as it contains a number of sequence duplications throughout its length. The evolutionary events that may have led to the high number of duplications was also reconstructed.

    • Michael C. Zody
    • Manuel Garber
    • Chad Nusbaum
    Research
    Nature
    Volume: 440, P: 671-675
  • Caenorhabditis nematodes are important model organisms. Here, the authors report the biology and genome of Caenorhabditis inopinata, a first sibling species of C. elegans, and develop genetic and molecular techniques for C. inopinata.

    • Natsumi Kanzaki
    • Isheng J. Tsai
    • Taisei Kikuchi
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-12