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Here, the authors perform metagenomic analysis of honeybee gut microbes, uncovering many previously unidentified species and host specific differences in composition and function, highlighting the dynamic evolution of specialized microbiota in these ecologically vital pollinators.

Color center magnetometry enables spin-wave imaging in complex magnetic textures. This work overcomes key limitations of current approaches by decoupling sensor spins from control fields and using diamond and hBN color centers for complementary frequency operation, achieving isofrequency imaging of field-controlled spin waves.

Hole spin semiconductor qubits suffer from charge noise, but now it has been demonstrated that placing them in an appropriately oriented magnetic field can suppress this noise and improve qubit performance.

Scanning dielectric microscopy of nanocapillaries filled with water reveals that interfacial and strongly confined water exhibits a large in-plane dielectric constant and an in-plane conductivity approaching superionic values. 

Reconfigurable arrays of up to 448 neutral atoms are used to implement and combine the key elements of a universal, fault-tolerant quantum processing architecture and experimentally explore their underlying working mechanisms.

Terahertz-frequency communications promise ultra-high data rates and stable latency, yet current systems lag behind infrared technologies. Here, the authors demonstrate a pioneering multi-gigabit-per-second free-space optical communication using a terahertz quantum cascade laser, setting the stage for advanced wireless networks with significant implications for high-speed data transmission.

Ionizing radiation from cosmic rays has been identified as a source of correlated errors in superconducting qubits, but a direct demonstration of this link has been lacking. Here the authors measure the coincidence between correlated errors and incident cosmic rays in a chip with 10 transmon qubits.

Large-scale genome-wide analyses identify hundreds of genetic loci associated with hypothyroidism and thyroid hormone levels, demonstrating the potential of using polygenic risk scores to predict disease onset and progression.

Polygenic scores for body mass index and obesity constructed using data from 5 million people with different ancestries were associated with distinct weight gain trajectories from early childhood to adulthood.

Spin-to-charge conversion is the process through with a spin current is converted into charge current. It, along with its inverse effect, represents an essential building block for spintronics devices. Here, Choi et al. demonstrate non-volatile control of spin-to-charge conversion in a ferroelectric and graphene based heterostructure.

Current physical neuromorphic computing faces critical challenges of how to reconfigure key physical dynamics of a system to adapt computational performance to match a diverse range of tasks. Here the authors present a task-adaptive approach to physical neuromorphic computing based on on-demand control of computing performance using various magnetic phases of chiral magnets.

ADHD is often found to be comorbid with disruptive behavior disorders, but the genetic loci underlying this comorbidity are unknown. Here, the authors have performed a GWAS meta-analysis of ADHD with disruptive behavior disorders, finding three genome-wide significant loci in Europeans, and replicating one in a Chinese cohort.

A large genome-wide association study of more than 5 million individuals reveals that 12,111 single-nucleotide polymorphisms account for nearly all the heritability of height attributable to common genetic variants.

A trans-ancestry meta-analysis of GWAS of glycemic traits in up to 281,416 individuals identifies 99 novel loci, of which one quarter was found due to the multi-ancestry approach, which also improves fine-mapping of credible variant sets.

An integrated device that combines optical parametric oscillation and electro-optic modulation in lithium niobate creates a flat-top frequency-comb-like output with low power requirements.

Squeezed light allows for quantum-enhanced, sub-shot-noise sensing, but its generation and use on a chip has so far remained elusive. Here, the authors fill this gap by demonstrating a thin-film lithium-niobate-based integrated quantum optical sensor, which beats shot-noise-limited SNR by ~ 4%.

Multidrug-resistant pathogens have become increasingly common in hospital settings. Here, the authors investigate the efficacy of adjunctive antibiotic and phage therapy in a human cell model and a murine model of ventilator-associated pneumonia.

A meta-analysis of genome-wide association studies of type 2 diabetes (T2D) identifies more than 600 T2D-associated loci; integrating physiological trait and single-cell chromatin accessibility data at these loci sheds light on heterogeneity within the T2D phenotype.

The decay of electrostatic charges largely reduces the protective efficacy of electret masks. Here, the authors report a triboelectrification-based self-charging electrostatic face mask with high airborne particle capture efficiency and prolonged stability.

The authors combined optical traps and frequency combs to create new acoustic technology – a mechanical frequency comb. The generation of this comb does not require any precision control, making it uniquely positioned for sensing, metrology, and quantum technology.

Around 1 in 136 pregnancies is lost due to a pathogenic small sequence variant genotype in the fetus.

Genome-wide association and fine-mapping analyses in ancestrally diverse populations implicate candidate causal genes and mechanisms underlying type 2 diabetes. Trans-ancestry genetic risk scores enhance transferability across populations.

The authors present SVclone, a computational method for inferring the cancer cell fraction of structural variants from whole-genome sequencing data.

Currently, genetically encoded calcium indicators are not suitable for direct quantification. Here the authors engineer a fluorescence lifetime imaging calcium biosensor, Turquoise Calcium Fluorescence LIfeTime Sensor (Tq-Ca-FLITS), and measure intracellular calcium concentrations in human-derived organoids.

Pressure ridges, a characteristic feature of Arctic sea ice, play an important role in the ecosystem but pose challenges to shipping. Here the authors use aircraft measurements to document a decline in both the frequency and height of these pressure ridges in recent decades.

Optical intensity modulators are an important component in optics. Here, the authors demonstrate a type of resonant intensity modulator operating in the megahertz frequency regime with record high efficiency and use it for time-of-flight imaging.

Screening commercial kinase inhibitors for antibacterial activity identified the anticancer drug sorafenib as a major hit. Subsequent structure–activity optimization created a new antibacterial analogue with high potency against methicillin-resistant Staphylococcus aureus, including challenging persisters and biofilms, as well as demonstrating efficacy in an in vivo mouse model. The mode of action involves stimulation of protein secretion and inhibition of menaquinone biosynthesis.

The authors present a multiomics study of type 2 diabetes and quantitative blood lipid and lipoprotein traits in Hispanic/Latino populations. They demonstrate how integrating GWAS with omics characterization can advance precision medicine.

Analyses of 2,658 whole genomes across 38 types of cancer identify the contribution of non-coding point mutations and structural variants to driving cancer.

Inbreeding depression has been observed in many different species, but in humans a systematic analysis has been difficult so far. Here, analysing more than 1.3 million individuals, the authors show that a genomic inbreeding coefficient (FROH) is associated with disadvantageous outcomes in 32 out of 100 traits tested.

Integrative analyses of transcriptome and whole-genome sequencing data for 1,188 tumours across 27 types of cancer are used to provide a comprehensive catalogue of RNA-level alterations in cancer.

The characterization of 4,645 whole-genome and 19,184 exome sequences, covering most types of cancer, identifies 81 single-base substitution, doublet-base substitution and small-insertion-and-deletion mutational signatures, providing a systematic overview of the mutational processes that contribute to cancer development.

With the generation of large pan-cancer whole-exome and whole-genome sequencing projects, a question remains about how comparable these datasets are. Here, using The Cancer Genome Atlas samples analysed as part of the Pan-Cancer Analysis of Whole Genomes project, the authors explore the concordance of mutations called by whole exome sequencing and whole genome sequencing techniques.

The flagship paper of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium describes the generation of the integrative analyses of 2,658 cancer whole genomes and their matching normal tissues across 38 tumour types, the structures for international data sharing and standardized analyses, and the main scientific findings from across the consortium studies.

An analysis of 2,954 genomes from 38 cancer subtypes identified 19,166 retrotransposition events in 35% of samples. Aberrant LINE-1 retrotranspositions can lead to the deletion of tumor-suppressor genes as well as the amplification of oncogenes.

Whole-genome sequencing data for 2,778 cancer samples from 2,658 unique donors across 38 cancer types is used to reconstruct the evolutionary history of cancer, revealing that driver mutations can precede diagnosis by several years to decades.

Many tumours exhibit hypoxia (low oxygen) and hypoxic tumours often respond poorly to therapy. Here, the authors quantify hypoxia in 1188 tumours from 27 cancer types, showing elevated hypoxia links to increased mutational load, directing evolutionary trajectories.

Sick heart and vessels skew hematopoiesis toward inflammatory myeloid cells. Rhode et al. show that hypertension, atherosclerosis and myocardial infarction cause endothelial dysfunction in bone marrow (BM), which in return causes overproduction of inflammatory myeloid cells and systemic leukocytosis in mice. This process is mediated by VEGF signaling, IL-6 and versican production by the BM endothelium.

There’s an emerging body of evidence to show how biological sex impacts cancer incidence, treatment and underlying biology. Here, using a large pan-cancer dataset, the authors further highlight how sex differences shape the cancer genome.

Analysis of cancer genome sequencing data has enabled the discovery of driver mutations. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium the authors present DriverPower, a software package that identifies coding and non-coding driver mutations within cancer whole genomes via consideration of mutational burden and functional impact evidence.