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Showing 101–150 of 4024 results
Advanced filters: Author: James Speed Clear advanced filters
  • The structure-function relationships of a β-helix, a folding motif formed by parallel β-strands arranged in a helical repetitive pattern, remain poorly understood and underexploited. Here, the authors reconstitute a protein β-helix by design from an elementary sequence of 18 amino acids, which self-assembles into a self-contained multifunctional motif exhibiting a range of biological functions.

    • Camilla Dondi
    • Javier Garcia-Ruiz
    • Maxim G. Ryadnov
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-18
  • Net-zero policies can put pressure on land use, which can conflict with preserving natural landscapes, cultural sites and agricultural areas. Now a study integrates national energy models with proactive and collaborative planning to design net-zero pathways that conserve natural capital and address diverse concerns.

    • Andrew C. Pascale
    • James E. M. Watson
    • Chris Greig
    Research
    Nature Sustainability
    Volume: 8, P: 619-628
  • Here the authors show that loss of TANGO2, a gene linked to an autosomal recessive disorder characterised by developmental delay, rhabdomyolysis, cardiac arrhythmias and metabolic disturbances, disrupts mitochondrial and cytoskeletal structure by impairing its interaction with CRYAB, leading to desmin aggregation and desminopathy, causing cardiomyopathy, muscle weakness, and metabolic dysfunction in mice and human cells.

    • Maike Stentenbach
    • Laetitia A. Hughes
    • Aleksandra Filipovska
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-17
  • Analysing data on egg size and planktonic duration from >750 marine species with a larval period, the authors show that temperature, life-history and oceanographic processes interact to shape peaks of dispersal at low and high latitudes.

    • Mariana Álvarez-Noriega
    • Scott C. Burgess
    • Dustin J. Marshall
    Research
    Nature Ecology & Evolution
    Volume: 4, P: 1196-1203
  • Freely falling granular streams break up into characteristic droplet patterns similar to liquid flows, but the clustering mechanism remains unresolved. Here, imaging and microscopy data reveal that tiny cohesive forces are responsible, corresponding to a granular surface tension some 100,000 times weaker than in ordinary liquids.

    • John R. Royer
    • Daniel J. Evans
    • Heinrich M. Jaeger
    Research
    Nature
    Volume: 459, P: 1110-1113
  • This paper describes the use of optical microendoscopy to visualize sarcomeres and their micron-scale motions in live mice and humans, revealing unanticipated local variations in sarcomere lengths. Imaging of human sarcomeres is expected to enable advances in biomechanical modelling, orthopedic therapeutics, and the understanding and treatment of neuromuscular disorders

    • Michael E. Llewellyn
    • Robert P. J. Barretto
    • Mark J. Schnitzer
    Research
    Nature
    Volume: 454, P: 784-788
  • A miniature epifluorescence microscope that can be carried by a freely-moving adult mouse allows cellular-level imaging of neuronal spiking or measurement of microcirculation during normal behavioral activities.

    • Benjamin A Flusberg
    • Axel Nimmerjahn
    • Mark J Schnitzer
    Research
    Nature Methods
    Volume: 5, P: 935-938
  • In vivo chimeric antigen receptor (CAR)-T cell engineering uses targeted delivery systems to generate CAR-T cells directly in patients, bypassing ex vivo manufacturing. This Review examines emerging viral and lipid nanoparticle platforms, early clinical proof of concept and potential applications beyond cancer.

    • Adrian Bot
    • Andrew Scharenberg
    • Carl H. June
    Reviews
    Nature Reviews Drug Discovery
    P: 1-22
  • Chromosomes are coated in proteins and RNA called the mitotic chromosome periphery. Here, broadband microrheology analysis has shown that this coat has dynamic, liquid-like properties and provides an external structural constraint.

    • Tania Mendonca
    • Roman Urban
    • Daniel G. Booth
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-11
  • Wang, Tang and colleagues develop the low-signal signed iterative random forest pipeline to investigate epistasis in the genetic control of cardiac hypertrophy, identifying epistatic variants near CCDC141, IGF1R, TTN and TNKS loci, and show that hypertrophy in induced pluripotent stem cell-derived cardiomyocytes is nonadditively influenced by interactions among CCDC141, TTN and IGF1R.

    • Qianru Wang
    • Tiffany M. Tang
    • Euan A. Ashley
    ResearchOpen Access
    Nature Cardiovascular Research
    Volume: 4, P: 740-760
  • Multi-omics datasets pose major challenges to data interpretation and hypothesis generation owing to their high-dimensional molecular profiles. Here, the authors develop ActivePathways method, which uses data fusion techniques for integrative pathway analysis of multi-omics data and candidate gene discovery.

    • Marta Paczkowska
    • Jonathan Barenboim
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-16
  • The Mass Spectrometry Query Language (MassQL) is an open-source language that enables instrument-independent searching across mass spectrometry data for complex patterns of interest via concise and expressive queries without the need for programming skills.

    • Tito Damiani
    • Alan K. Jarmusch
    • Mingxun Wang
    ResearchOpen Access
    Nature Methods
    Volume: 22, P: 1247-1254
  • A preclinical covalent compound, CMX410, contains a aryl fluorosulfate warhead that targets the acyltransferase domain of Mtb Pks13, an essential enzyme in cell-wall biosynthesis, making it a promising candidate for tuberculosis treatment regimens.

    • Inna V. Krieger
    • Paridhi Sukheja
    • Case W. McNamara
    Research
    Nature
    Volume: 645, P: 755-763
  • Neuromodulators that activate Gq-coupled receptors exert powerful control over brain function. Here, the authors develop a fluorescence lifetime sensor capable of imaging protein kinase C activity—a major effector of the Gq pathway—at cellular resolution in vivo.

    • Takaki Yahiro
    • Landon Bayless-Edwards
    • Haining Zhong
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-12
  • Aardvark Weather, an end-to-end machine learning model, replaces the entire numerical weather prediction pipeline with a machine learning model, by producing accurate global and local forecasts without relying on numerical solvers, revolutionizing weather prediction with improved speed, accuracy and customization capabilities.

    • Anna Allen
    • Stratis Markou
    • Richard E. Turner
    ResearchOpen Access
    Nature
    Volume: 641, P: 1172-1179
  • Black phosphorus (BP) is considered a promising van der Waals material for the realization of mid-infrared detectors. Here, the authors report the realization of flexible infrared imagers based on solution-processed BP photodiodes on thin plastic substrates, showing long term stability and mechanical robustness.

    • Theodorus Jonathan Wijaya
    • Naoki Higashitarumizu
    • Ali Javey
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-10
  • Adaptive optics (AO) corrects eye aberrations for sharp imaging, but their dynamics in clinical scenarios are much higher than expected. Ultrafast AO improves aberration correction and retinal imaging performance in these cases.

    • Yan Liu
    • James A. Crowell
    • Donald T. Miller
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-17
  • The authors reveal that the ocean right above the sloping seafloor flows on average downhill and that this downhill flow recirculates upward in the overlying water column using ocean velocity observations and numerical ocean simulations.

    • René Schubert
    • Jonathan Gula
    • James C. McWilliams
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-14
  • An optically addressable fluorescent-protein spin qubit is realized using enhanced yellow fluorescent protein; the qubit can be coherently controlled at liquid-nitrogen temperatures and the spin detected at room temperature in cells.

    • Jacob S. Feder
    • Benjamin S. Soloway
    • Peter C. Maurer
    ResearchOpen Access
    Nature
    Volume: 645, P: 73-79
  • Shape morphing is crucial for soft robotics, but conventional methods often induce unwanted in-plane strain and rigidity. Authors propose pneumatic torsion strips inspired by Möbius strips, enabling localized, strain-free bending with tunable elastic energy for shape morphing.

    • Changchun Wu
    • Hao Liu
    • Yonghua Chen
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-11
  • Here, Robert-Paganin et al. show that myosin A from Plasmodium falciparum is critical for red blood cell invasion and that non-canonical interactions and regulated phosphorylation are important for force generation during parasite invasion.

    • Julien Robert-Paganin
    • James P. Robblee
    • Anne Houdusse
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-12
  • A method, RARE-seq, for sensitive detection of cell-free RNAs in blood is demonstrated to have diverse clinical applications including diagnosing and characterizing human cancers, and tracking response to RNA therapeutics.

    • Monica C. Nesselbush
    • Bogdan A. Luca
    • Maximilian Diehn
    Research
    Nature
    Volume: 641, P: 759-768
  • Dual sequencing of the epigenome and genome could have broad implications in oncology.

    • James M. George
    • Arul M. Chinnaiyan
    News & Views
    Nature Biotechnology
    Volume: 41, P: 1392-1393
  • Fully enclosed, controlled-environment growth chambers can accelerate plant development. Such ‘speed breeding’ reduces generation times to accelerate crop breeding and research programmes, and can integrate with other modern crop breeding technologies.

    • Amy Watson
    • Sreya Ghosh
    • Lee T. Hickey
    Research
    Nature Plants
    Volume: 4, P: 23-29
  • Confident molecular identification is key for studying complex biochemistry. Here, the authors employ Quantum-Cascade Laser-based Mid-infrared imaging for rapid identification of ROIs, followed by MALDI imaging prm-PASEF for in-depth lipid identifications directly on complex tissues.

    • Lars Gruber
    • Stefan Schmidt
    • Carsten Hopf
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • Challenging long-held assumptions, this research reveals that people can learn to control bionic hands just as effectively, and in some ways better, using arbitrary control strategies compared with control strategies that mimic the human body.

    • Hunter R. Schone
    • Malcolm Udeozor
    • Chris I. Baker
    ResearchOpen Access
    Nature Human Behaviour
    Volume: 8, P: 1108-1123
  • Wood density is a key control on tree biomass, and understanding its spatial variation improves estimates of forest carbon stock. Sullivan et al. measure >900 forest plots to quantify wood density and produce high resolution maps of its variation across South American tropical forests.

    • Martin J. P. Sullivan
    • Oliver L. Phillips
    • Joeri A. Zwerts
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-12
  • Viral pathogen load in cancer genomes is estimated through analysis of sequencing data from 2,656 tumors across 35 cancer types using multiple pathogen-detection pipelines, identifying viruses in 382 genomic and 68 transcriptome datasets.

    • Marc Zapatka
    • Ivan Borozan
    • Christian von Mering
    ResearchOpen Access
    Nature Genetics
    Volume: 52, P: 320-330
  • Cancers evolve as they progress under differing selective pressures. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, the authors present the method TrackSig the estimates evolutionary trajectories of somatic mutational processes from single bulk tumour data.

    • Yulia Rubanova
    • Ruian Shi
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Circadian clocks enable organisms to anticipate daily cycles, while being robust to molecular and environmental noise. Here, Eremina et al. show how the cyanobacterial clock buffers genetic and environmental perturbations through its core phosphorylation loop, and demonstrate that known clock regulators are dispensable for clock robustness.

    • Aleksandra Eremina
    • Christian Schwall
    • James C. W. Locke
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-14
  • Closed-loop brain stimulation of the human hippocampal theta rhythm produces lasting enhancement of network communication. This implicates theta rhythms in human hippocampal network communication and provides a possible route to memory modulation.

    • James E. Kragel
    • Sarah M. Lurie
    • Joel L. Voss
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-11