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Showing 1–50 of 828 results
Advanced filters: Author: Jason Kim Clear advanced filters
  • A few anisotropic van der Waals materials have been shown to host hyperbolic polaritons in the visible and infrared ranges. Here, the authors characterize the complex dielectric function of hexagonal boron nitride in the deep-ultraviolet regime, supporting a natural hyperbolic dispersion and predicting hyperbolic exciton polaritons.

    • Bongjun Choi
    • Jason Lynch
    • Deep Jariwala
    ResearchOpen Access
    Nature Communications
    P: 1-9
  • Therapies combining chemotherapy and immune checkpoint inhibitors have shown limited efficacy in patients with advanced pancreatic ductal adenocarcinoma (PDAC). Here the authors report the results of a pilot phase 1 trial of neoadjuvant modified Folfirinox plus nivolumab in borderline-resectable PDAC, including safety, efficacy and immunological correlates.

    • Zev A. Wainberg
    • Jason M. Link
    • Timothy R. Donahue
    ResearchOpen Access
    Nature Communications
    P: 1-13
  • Conventional type 1 dendritic cells (cDC1) can boost the precursor exhausted T cell population thought to be essential for efficacy of immune checkpoint therapy. Here the authors enhance this cellular network using Flt3L to expand cDC1s and then map the movement of T cells and DCs between tumors and lymph nodes.

    • Junyun Lai
    • Cheok Weng Chan
    • Phillip K. Darcy
    ResearchOpen Access
    Nature Immunology
    P: 1-13
  • The APOE-ε4 allele is the strongest genetic risk factor for late-onset Alzheimer’s disease, but it is not deterministic. Here, the authors show that common genetic variation changes how APOE-ε4 influences cognition.

    • Alex G. Contreras
    • Skylar Walters
    • Timothy J. Hohman
    ResearchOpen Access
    Nature Communications
    P: 1-17
  • The oil-based sticky residues on solar cells pose a significant challenge water-based cleaning of the surfaces. Here, authors report a disconnected grid pattern with domed top surfaces and hyperbolic sidewalls for super-omniphobicity and to minimize oil adhesion, enhancing photovoltaic efficiency.

    • Mike Jason Koleczko
    • Yebin Ahn
    • Hyunsik Yoon
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-11
  • Proton-exchange membrane water electrolysers rely on iridium to catalyse their anodic reaction, and while ruthenium is a less costly alternative due to its similar activity, it is not as stable. Now, a hierarchical machine-learning catalyst discovery workflow, termed mixed acceleration, is put forward to predict catalyst synthesis, activity and stability, and identify promising RuOx-based water oxidation catalysts.

    • Yang Bai
    • Kangming Li
    • Jason Hattrick-Simpers
    Research
    Nature Catalysis
    Volume: 9, P: 28-36
  • A global network of researchers was formed to investigate the role of human genetics in SARS-CoV-2 infection and COVID-19 severity; this paper reports 13 genome-wide significant loci and potentially actionable mechanisms in response to infection.

    • Mari E. K. Niemi
    • Juha Karjalainen
    • Chloe Donohue
    ResearchOpen Access
    Nature
    Volume: 600, P: 472-477
  • This work introduces a wireless, battery-free soil sensor that enables subsoil monitoring of moisture and salinity using drone-readable signals. The system allows scalable, low-cost deployment across farms, helping improve agricultural efficiency and sustainability.

    • Yashwanth Ramesh
    • Muhammad Masud Rana
    • Rahim Rahimi
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-15
  • Epstein–Barr virus (EBV) is a widespread herpesvirus linked to cancer and autoimmune disease. The authors in this work design and characterize a stabilized prefusion form of gB, an essential viral fusion protein, advancing EBV vaccine and therapeutic development.

    • Ryan S. McCool
    • Cory M. Acreman
    • Jason S. McLellan
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-13
  • RFdiffusion2, an extension of the RFdiffusion framework, builds de novo enzyme active sites using atom-level functional group constraints.

    • Woody Ahern
    • Jason Yim
    • David Baker
    ResearchOpen Access
    Nature Methods
    Volume: 23, P: 96-105
  • There is a need for an easy-to-use clinical tool, that could predict favorable early PSA response and subsequently enhance early risk stratification, as well as guide treatment planning. Here, the authors show that based on patient data from four phase III randomized trials, Nadir androgen receptor pathway inhibitor (APRI)- Derived Integrative Response (NADIR) model predicts favorable early PSA response to ≤0.2 ng/mL by 6 months in metastatic hormone sensitive prostate cancer (mHSPC) patients initiating treatment with an APRI.

    • Soumyajit Roy
    • Yilun Sun
    • Daniel E. Spratt
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-10
  • A generative artificial intelligence-powered method enables de novo design of highly active enzymes based on information about the geometry of residues in the active site, without requiring protein backbone or sequence information.

    • Donghyo Kim
    • Seth M. Woodbury
    • David Baker
    ResearchOpen Access
    Nature
    Volume: 649, P: 246-253
  • Understanding the mechanisms underlying the survival of drug tolerant persister cells following chemotherapy remains elusive. Here, multi-omics analysis and experimental approaches show that the germ-cell-specific H3K4 methyltransferase PRDM9 promotes metabolic rewiring in glioblastoma stem cells.

    • George L. Joun
    • Emma G. Kempe
    • Lenka Munoz
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-30
  • Arginine methylation by PRMTs is dysregulated in cancer. Here, the authors use functional genomics screens and identify PRMT1 as a vulnerability in pancreatic ductal adenocarcinoma, and further show that PRMT1 regulates RNA metabolism and coordinates expression of genes in cell cycle progression, maintaining genomic stability and tumour growth.

    • Virginia Giuliani
    • Meredith A. Miller
    • Timothy P. Heffernan
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-19
  • Early high-resolution images of two 2021 novae reveal eruptions unfolding in multiple stages with colliding outflows that produce shocks and gamma rays, reshaping our understanding of stellar explosions.

    • Elias Aydi
    • John D. Monnier
    • Anna V. Payne
    ResearchOpen Access
    Nature Astronomy
    Volume: 10, P: 271-280
  • Long COVID has heterogeneous presentation and clinical trajectories are not well defined. Here, the authors define trajectories using data from a prospective cohort study in the United States involving symptom questionnaires from acute infection up to 15 months.

    • Tanayott Thaweethai
    • Sarah E. Donohue
    • Bruce D. Levy
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-10
  • Analyses of 2,658 whole genomes across 38 types of cancer identify the contribution of non-coding point mutations and structural variants to driving cancer.

    • Esther Rheinbay
    • Morten Muhlig Nielsen
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 102-111
  • Here the authors provide an explanation for 95% of examined predicted loss of function variants found in disease-associated haploinsufficient genes in the Genome Aggregation Database (gnomAD), underscoring the power of the presented analysis to minimize false assignments of disease risk.

    • Sanna Gudmundsson
    • Moriel Singer-Berk
    • Anne O’Donnell-Luria
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-14
  • The authors mapped the dendritic morphology of thousands of striatal D1-type and D2-type medium spiny neurons in healthy and Huntington’s disease mouse brains, revealing dendritic modules with distinct neuronal shapes, spatial distributions and cortical inputs.

    • Chang Sin Park
    • Ming Yan
    • X. William Yang
    Research
    Nature Neuroscience
    Volume: 28, P: 2628-2643
  • Here, the authors develop novel dynamical methods to model brain regions’ intrinsic neural timescales (INTs) from data, and find that they couple whole-brain structural connectivity to dynamic switching between brain activity states, and correlate with genetic markers.

    • Jason Z. Kim
    • Richard F. Betzel
    • Linden Parkes
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-19
  • A flexible micro-electrocorticography brain–computer interface that integrates a 256 × 256 array of electrodes, signal processing, data telemetry and wireless powering on a single complementary metal–oxide–semiconductor substrate can provide stable, chronic in vivo recordings.

    • Taesung Jung
    • Nanyu Zeng
    • Kenneth L. Shepard
    Research
    Nature Electronics
    Volume: 8, P: 1272-1288
  • Polyamines produced by gut bacteria have been proposed to contribute to inflammatory bowel diseases. Here, Nauta et al. show that bacteria can produce a noncanonical polyamine intermediate that functions similarly to deoxyhypusine synthase inhibitors, activates mitochondrial stress responses, and inhibits nematode development and mouse macrophage differentiation.

    • Kelsie M. Nauta
    • Darrick R. Gates
    • Nicholas O. Burton
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • A complementary metal–oxide–semiconductor (CMOS) imager that has a 512-pixel silicon image sensor post-processed into a 4.1-mm-long, 120-μm-wide shank with a collinear fibre for illumination can be used to record transient fluorescent signals in deep brain regions at 400 frames per second.

    • Sinan Yilmaz
    • Jaebin Choi
    • Kenneth L. Shepard
    Research
    Nature Electronics
    Volume: 8, P: 1247-1258
  • The flagship paper of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium describes the generation of the integrative analyses of 2,658 cancer whole genomes and their matching normal tissues across 38 tumour types, the structures for international data sharing and standardized analyses, and the main scientific findings from across the consortium studies.

    • Lauri A. Aaltonen
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 82-93
  • Researchers demonstrate that wrinkles and folds on polymer surfaces can improve the light-harvesting capabilities of solar cells, increasing external quantum efficiencies by up to 600% in the near-infrared. This fabrication method, which employs elastic instabilities of thin, layered materials, may be economical for patterning photonic structures over large areas.

    • Jong Bok Kim
    • Pilnam Kim
    • Yueh-Lin Loo
    Research
    Nature Photonics
    Volume: 6, P: 327-332
  • Metabolic liver disease is highly prevalent in subjects with obesity and involves inflammation, insulin resistance, and fibrosis, leading to cirrhosis. Here, the authors show the IFNγ-IL12 axis in regulating intercellular crosstalk in the liver and playing a major role in the pathogenesis of metabolic liver disease.

    • Randall H. Friedline
    • Hye Lim Noh
    • Jason K. Kim
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-18
  • In vivo experiments and clinical cohort analyses show that hypoxia-inducible factor 2 (HIF2)-induced parathyroid hormone-related protein (PTHrP) expression contributes to cachexia in the context of renal cell carcinoma (RCC). The pathway can be targeted by HIF2 inhibitors, including belzutifan, which may reduce cachexia in patients with RCC.

    • Muhannad Abu-Remaileh
    • Laura A. Stransky
    • William G. Kaelin Jr
    ResearchOpen Access
    Nature Medicine
    Volume: 32, P: 245-257
  • Genome-wide association studies (GWAS) have improved our understanding of the genetic basis of lung adenocarcinoma but known susceptibility variants explain only a small fraction of the familial risk. Here, the authors perform a two-stage GWAS and report 12 novel genetic loci associated with lung adenocarcinoma in East Asians.

    • Jianxin Shi
    • Kouya Shiraishi
    • Qing Lan
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-17
  • Here the authors show that gut metagenomes of Indigenous Australian infants living remotely, display greater diversity and abundance of bacteria, viruses and fungi, compared to non-Indigenous infants living in urban Australia, suggesting that while having access to Western foods, the infants start life with a gut microbiome that retains key features of pre-industrialized societies.

    • Leonard C. Harrison
    • Theo R. Allnutt
    • Jason Tye-Din
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • A large genome-wide association study of more than 5 million individuals reveals that 12,111 single-nucleotide polymorphisms account for nearly all the heritability of height attributable to common genetic variants.

    • Loïc Yengo
    • Sailaja Vedantam
    • Joel N. Hirschhorn
    ResearchOpen Access
    Nature
    Volume: 610, P: 704-712
  • Future quantum communication technologies require entanglement between stationary and flying qubits, in systems that are inherently scalable. To this end, De Greveet al.present full state tomography of a qubit pair formed by entangling a quantum dot spin and a photon, with a fidelity of over 90%.

    • Kristiaan De Greve
    • Peter L. McMahon
    • Yoshihisa Yamamoto
    Research
    Nature Communications
    Volume: 4, P: 1-7
  • Understanding deregulation of biological pathways in cancer can provide insight into disease etiology and potential therapies. Here, as part of the PanCancer Analysis of Whole Genomes (PCAWG) consortium, the authors present pathway and network analysis of 2583 whole cancer genomes from 27 tumour types.

    • Matthew A. Reyna
    • David Haan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-17
  • Analysis of cancer genome sequencing data has enabled the discovery of driver mutations. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium the authors present DriverPower, a software package that identifies coding and non-coding driver mutations within cancer whole genomes via consideration of mutational burden and functional impact evidence.

    • Shimin Shuai
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Multi-omics datasets pose major challenges to data interpretation and hypothesis generation owing to their high-dimensional molecular profiles. Here, the authors develop ActivePathways method, which uses data fusion techniques for integrative pathway analysis of multi-omics data and candidate gene discovery.

    • Marta Paczkowska
    • Jonathan Barenboim
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-16
  • The characterization of 4,645 whole-genome and 19,184 exome sequences, covering most types of cancer, identifies 81 single-base substitution, doublet-base substitution and small-insertion-and-deletion mutational signatures, providing a systematic overview of the mutational processes that contribute to cancer development.

    • Ludmil B. Alexandrov
    • Jaegil Kim
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 94-101