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Showing 51–100 of 1595 results
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  • A genome-wide association meta-analysis study of blood lipid levels in roughly 1.6 million individuals demonstrates the gain of power attained when diverse ancestries are included to improve fine-mapping and polygenic score generation, with gains in locus discovery related to sample size.

    • Sarah E. Graham
    • Shoa L. Clarke
    • Cristen J. Willer
    Research
    Nature
    Volume: 600, P: 675-679
  • Analysis of cancer genome sequencing data has enabled the discovery of driver mutations. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium the authors present DriverPower, a software package that identifies coding and non-coding driver mutations within cancer whole genomes via consideration of mutational burden and functional impact evidence.

    • Shimin Shuai
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • This paper determines the oxygen fugacity of the Chang’e-6 basalts from the South Pole–Aitken (SPA) basin on the farside of the Moon. The results show that the mantle beneath the farside SPA basin is more reduced than that beneath the nearside, as determined by the Apollo and Chang’e-5 basalts.

    • Huijuan Zhang
    • Wei Yang
    • Fu-Yuan Wu
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-8
  • The authors present SVclone, a computational method for inferring the cancer cell fraction of structural variants from whole-genome sequencing data.

    • Marek Cmero
    • Ke Yuan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-15
  • Spiracles are tubes that connect the buccopharyngeal cavity with the surface of the skull and are found in many early-diverging fish lineages. Here the authors provide evidence that polypterid fishes use their spiracles to breathe air, and suggest that stem tetrapods may have used them similarly.

    • Jeffrey B. Graham
    • Nicholas C. Wegner
    • John A. Long
    Research
    Nature Communications
    Volume: 5, P: 1-6
  • This Review discusses multiomic approaches for the characterization and biological understanding of cellular senescence, including detailed case studies on skeletal muscle and adipose tissue that highlight current outstanding issues in the field.

    • Sheng Li
    • Paula A. Agudelo Garcia
    • Rong Fan
    Reviews
    Nature Genetics
    Volume: 57, P: 2381-2394
  • In this Consensus Statement, a consortium of microbiome scientists discuss current sequencing data sharing policies and propose the use of a Data Reuse Information (DRI) tag to promote equitable and collaborative data sharing.

    • Laura A. Hug
    • Roland Hatzenpichler
    • Alexander J. Probst
    Reviews
    Nature Microbiology
    Volume: 10, P: 2384-2395
  • Neural networks fundamentally dictate function. Here, the authors show thirteen uniquely connected neuron populations within the anterior thalamic nuclei, suggesting multiple parallel subnetworks support its emotional and cognitive functions.

    • Houri Hintiryan
    • Mitchell Rudd
    • Hong-Wei Dong
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-26
  • Formic acid is a promising energy carrier for on-demand hydrogen generation. Here, the authors present a robust, reusable iridium catalyst that enables hydrogen release from neat formic acid under mild conditions and in the presence of air.

    • Jeff Joseph A. Celaje
    • Zhiyao Lu
    • Travis J. Williams
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-6
  • Electroreduction of CO2 into C2 hydrocarbons and liquid fuels is a promising but challenging energy conversion technology, with copper exhibiting fair selectivity for these products. Here, the authors report that N-doped graphene quantum dots can also catalyze the electrochemical reduction of CO2into multi-carbon hydrocarbons and oxygenates.

    • Jingjie Wu
    • Sichao Ma
    • Pulickel M. Ajayan
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-6
  • In this phase 1 trial, patients with locally advanced or metastatic solid tumors were treated with the individualized mRNA neoantigen-specific immunotherapy (iNeST) autogene cevumeran alone or in combination with the anti-PD-L1 agent atezolizumab, showing long-lasting neoantigen-specific immune responses and preliminary clinical activity, supporting further development of this therapeutic approach.

    • Juanita Lopez
    • Thomas Powles
    • D. Ross Camidge
    ResearchOpen Access
    Nature Medicine
    Volume: 31, P: 152-164
  • Viral pathogen load in cancer genomes is estimated through analysis of sequencing data from 2,656 tumors across 35 cancer types using multiple pathogen-detection pipelines, identifying viruses in 382 genomic and 68 transcriptome datasets.

    • Marc Zapatka
    • Ivan Borozan
    • Christian von Mering
    ResearchOpen Access
    Nature Genetics
    Volume: 52, P: 320-330
  • Investigating the inner structure of baryons is important to further our understanding of the strong interaction. Here, the BESIII Collaboration extracts the absolute value of the ratio of the electric to magnetic form factors and its relative phase for e + e − → J/ψ → ΛΣ decays, enhancing the signal thanks to the vacuum polarisation effect at the J/ψ peak.

    • M. Ablikim
    • M. N. Achasov
    • J. Zu
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-9
  • Colour code on a superconducting qubit quantum processor is demonstrated, reporting above-breakeven performance and logical error scaling with increased code size by a factor of 1.56 moving from distance-3 to distance-5 code.

    • N. Lacroix
    • A. Bourassa
    • K. J. Satzinger
    ResearchOpen Access
    Nature
    Volume: 645, P: 614-619
  • Analyses of 2,658 whole genomes across 38 types of cancer identify the contribution of non-coding point mutations and structural variants to driving cancer.

    • Esther Rheinbay
    • Morten Muhlig Nielsen
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 102-111
  • Some cancer patients first present with metastases where the location of the primary is unidentified; these are difficult to treat. In this study, using machine learning, the authors develop a method to determine the tissue of origin of a cancer based on whole sequencing data.

    • Wei Jiao
    • Gurnit Atwal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • The characterization of 4,645 whole-genome and 19,184 exome sequences, covering most types of cancer, identifies 81 single-base substitution, doublet-base substitution and small-insertion-and-deletion mutational signatures, providing a systematic overview of the mutational processes that contribute to cancer development.

    • Ludmil B. Alexandrov
    • Jaegil Kim
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 94-101
  • Metamaterials can be designed with anisotropy, which tailors their optical properties to enable interesting functionalities. Here, the anisotropy of a Maltese-cross metamaterial is actively controlled by an actuator, allowing for tunable birefringence and dichroism in the terahertz frequency region.

    • W.M. Zhu
    • A.Q. Liu
    • N.I. Zheludev
    ResearchOpen Access
    Nature Communications
    Volume: 3, P: 1-6
  • Grasslands tend to be limited by both nutrient and water availability. Here the authors use standardized field experiments to show that the effects of nutrient addition on grassland biomass may cancel out the negative impact of drought, but the outcome depends on aridity and other local conditions.

    • V. F. Bondaruk
    • C. Xu
    • Y. Hautier
    Research
    Nature Ecology & Evolution
    Volume: 9, P: 937-946
  • DNA double-stranded breaks threaten genome stability. Here, the authors show that transcript RNA serves as a repair template in human cells and identify Polζ as a key factor in RNA-templated DSB repair. This process can lead to intron deletion, resulting in a mutational signature in cancer genomes.

    • Manisha Jalan
    • Alessandra Brambati
    • Agnel Sfeir
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • Charge transfer is facilitated in molecular systems through orbital coupling. Here the authors use core-hole-clock spectroscopy to show that electron transfer from an argon atom caged in a fullerene can be up to two orders of magnitude faster than for the isolated atom.

    • Connor Fields
    • Aleksandra Foerster
    • Philip Moriarty
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-10
  • The death of massive stars has traditionally been discovered by explosive events in the gamma-ray band. Liu et al. show that the sensitive wide-field monitor on board Einstein Probe can reveal a weak soft-X-ray signal much earlier than gamma rays.

    • Y. Liu
    • H. Sun
    • X.-X. Zuo
    Research
    Nature Astronomy
    Volume: 9, P: 564-576
  • Complete sequences of chromosomes telomere-to-telomere from chimpanzee, bonobo, gorilla, Bornean orangutan, Sumatran orangutan and siamang provide a comprehensive and valuable resource for future evolutionary comparisons.

    • DongAhn Yoo
    • Arang Rhie
    • Evan E. Eichler
    ResearchOpen Access
    Nature
    Volume: 641, P: 401-418
  • Cancers evolve as they progress under differing selective pressures. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, the authors present the method TrackSig the estimates evolutionary trajectories of somatic mutational processes from single bulk tumour data.

    • Yulia Rubanova
    • Ruian Shi
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Ndeh et al. show that a genetic locus in the human gut bacterium, Bacteroides thetaiotaomicron, encodes a combination of glycosidases, a glycoprotease and a kinase enabling it to process and metabolise O-glycoproteins and the core mucin O-glycan sugar N-acetylgalactosamine.

    • Didier A. Ndeh
    • Sirintra Nakjang
    • David N. Bolam
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-20
  • There’s an emerging body of evidence to show how biological sex impacts cancer incidence, treatment and underlying biology. Here, using a large pan-cancer dataset, the authors further highlight how sex differences shape the cancer genome.

    • Constance H. Li
    • Stephenie D. Prokopec
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-24
  • Whole-genome sequencing data from more than 2,500 cancers of 38 tumour types reveal 16 signatures that can be used to classify somatic structural variants, highlighting the diversity of genomic rearrangements in cancer.

    • Yilong Li
    • Nicola D. Roberts
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 112-121
  • The neutron star birth-mass function, based on 90 mass measurements, shows a unimodal turn-on power-law shape peaking at 1.27 solar masses. This model links supernova progenitors and binary evolution to observed mass constraints.

    • Zhi-Qiang You
    • Xingjiang Zhu
    • Zong-Hong Zhu
    Research
    Nature Astronomy
    Volume: 9, P: 552-563
  • The ratio between the levels of two synaptic proteins in cerebrospinal fluid predicts future cognitive resilience versus decline among presymptomatic individuals and individuals with early Alzheimer’s disease harboring amyloid and tau pathology.

    • Hamilton Se-Hwee Oh
    • Deniz Yagmur Urey
    • Tony Wyss-Coray
    ResearchOpen Access
    Nature Medicine
    Volume: 31, P: 1592-1603
  • In somatic cells the mechanisms maintaining the chromosome ends are normally inactivated; however, cancer cells can re-activate these pathways to support continuous growth. Here, the authors characterize the telomeric landscapes across tumour types and identify genomic alterations associated with different telomere maintenance mechanisms.

    • Lina Sieverling
    • Chen Hong
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-13
  • With the generation of large pan-cancer whole-exome and whole-genome sequencing projects, a question remains about how comparable these datasets are. Here, using The Cancer Genome Atlas samples analysed as part of the Pan-Cancer Analysis of Whole Genomes project, the authors explore the concordance of mutations called by whole exome sequencing and whole genome sequencing techniques.

    • Matthew H. Bailey
    • William U. Meyerson
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-27
  • In a quantum simulation of a (2+1)D lattice gauge theory using a superconducting quantum processor, the dynamics of strings reveal the transition from deconfined to confined excitations as the effective electric field is increased.

    • T. A. Cochran
    • B. Jobst
    • P. Roushan
    ResearchOpen Access
    Nature
    Volume: 642, P: 315-320
  • The irradiation of crystalline materials is known to create various types of lattice defects, which can degrade mechanical performance. Here, Xu et al. observe the in-situnucleation and growth of atomic-scale voids in magnesium during electron irradiation.

    • Weizong Xu
    • Yongfeng Zhang
    • Yuntian Zhu
    Research
    Nature Communications
    Volume: 4, P: 1-6
  • Many tumours exhibit hypoxia (low oxygen) and hypoxic tumours often respond poorly to therapy. Here, the authors quantify hypoxia in 1188 tumours from 27 cancer types, showing elevated hypoxia links to increased mutational load, directing evolutionary trajectories.

    • Vinayak Bhandari
    • Constance H. Li
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-10
  • A large genome-wide association study of more than 5 million individuals reveals that 12,111 single-nucleotide polymorphisms account for nearly all the heritability of height attributable to common genetic variants.

    • Loïc Yengo
    • Sailaja Vedantam
    • Joel N. Hirschhorn
    ResearchOpen Access
    Nature
    Volume: 610, P: 704-712
  • Composites of carbon nanotubes and superconductors provide technologically important new, or improved, functionalities. Here, with a chemical solution approach, well-aligned carbon nanotube forests embedded in a superconducting NbC matrix are shown to effectively enhance the superconducting properties of NbC.

    • G.F. Zou
    • H.M. Luo
    • Q.X. Jia
    Research
    Nature Communications
    Volume: 2, P: 1-5
  • Analysis of a large cohort of metastatic breast cancer samples shows that APOBEC mutational signatures are enriched in post-treatment samples. APOBEC activity was also associated with mutations known to drive drug resistance.

    • Avantika Gupta
    • Andrea Gazzo
    • Sarat Chandarlapaty
    ResearchOpen Access
    Nature Genetics
    Volume: 57, P: 1452-1462
  • Greatly enhanced light absorption is reported in large perovskite quantum dots by realizing a transition with a giant oscillator strength at the optical bandgap.

    • Simon C. Boehme
    • Tan P. T. Nguyen
    • Gabriele Rainò
    ResearchOpen Access
    Nature Photonics
    Volume: 19, P: 864-870
  • Experimental evidence for charge coupling to ferroelectric soft mode is scarce. Here, the authors find a photogenerated coherent phonon coupling to the electronic transition above the bandgap in the van der Waals ferroelectric semiconductor NbOI2.

    • Chun-Ying Huang
    • Daniel G. Chica
    • Xiaoyang Zhu
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-9