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MKRN1 as a prioritized drug target for postpartum depression: evidence from druggable proteome profiling and multi-layer validation
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  • Published: 10 February 2026

MKRN1 as a prioritized drug target for postpartum depression: evidence from druggable proteome profiling and multi-layer validation

  • Tingting Jia1,2 na1,
  • Chengsong Yuan1 na1,
  • Shiyi Hu1,
  • Liangyue Xie1,
  • Andi Liu1,
  • Fengqin Qin3,
  • Yongji He4 &
  • …
  • Chengcheng Zhang  ORCID: orcid.org/0000-0002-2992-62911 

Translational Psychiatry , Article number:  (2026) Cite this article

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We are providing an unedited version of this manuscript to give early access to its findings. Before final publication, the manuscript will undergo further editing. Please note there may be errors present which affect the content, and all legal disclaimers apply.

Subjects

  • Biomarkers
  • Genomics

Abstract

Postpartum depression (PPD) is a significant global health concern affecting women, yet effective and innovative therapeutic targets remain limited. Although genome-wide association studies (GWAS) have identified genetic risk loci, their underlying mechanisms and translational potential remain poorly understood. Therefore, we integrated PPD GWAS data with protein quantitative trait loci from two independent datasets to identify risk genes through proteome-wide association studies (PWAS). Validation was performed using colocalization analysis and Mendelian randomization (MR). To assess the safety of genes as drug targets, phenome-wide MR (Phe-MR) was conducted using the UK Biobank disease data. Finally, we performed gene methylation analysis in PPD patients, alongside validation of expression in key brain regions including anterior cingulate gyrus (AnCg), dorsolateral prefrontal cortex, and nucleus accumbens, as well as in peripheral blood (whole blood and leukocytes), across depressive patients and chronic mild stress mice. Co-expression enrichment was used to identify biological pathways associated with risk genes. PWAS and colocalization analysis identified MKRN1 and CCDC92 as overlapping risk genes, with MKRN1 validated in MR. Phe-MR showed non-significant association between MKRN1 dysregulation and disease beyond depression and mood disorders, suggesting minimal off-target effects. Methylation analysis in PPD patients’ blood revealed significant hypomethylation of MKRN1, consistent with expression analysis that confirmed its upregulation in AnCg and as a biomarker in blood. Enrichment analysis indicated MKRN1 involvement in immune–inflammatory pathways. Our study identified MKRN1 as a therapeutic target for PPD, integrating multi-omics evidence from genomics, proteomics, and druggable proteome profiling, and offering a promising path for targeted treatments.

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Data availability

The data used in the study can be accessed and downloaded from original studies [40, 45,46,47,48, 59,60,61,62,63].

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Acknowledgements

We would like to thank the authors of original GWAS and pQTLs studies included in this article. All authors are grateful for participation in our research.

Funding

This work was partially supported by the Sichuan Science and Technology Program (2026NSFSC0591); the National Natural Science Foundation of China (82001413); the Key R&D Project of the Science and Technology Department of Sichuan Province (2021YFS0248); the China Postdoctoral Science Foundation (2020M673247); and the Postdoctoral Foundation of West China Hospital (2020HXBH163).

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Author notes
  1. These authors contributed equally: Tingting Jia, Chengsong Yuan.

Authors and Affiliations

  1. Mental Health Center and Psychiatric Laboratory, the State Key Laboratory of Biotherapy, West China Hospital of Sichuan University, Chengdu, Sichuan, China

    Tingting Jia, Chengsong Yuan, Shiyi Hu, Liangyue Xie, Andi Liu & Chengcheng Zhang

  2. Department of Gastroenterology and Hepatology and Sichuan University-University of Oxford Huaxi Joint Centre for Gastrointestinal Cancer, West China Hospital of Sichuan University, Chengdu, Sichuan, China

    Tingting Jia

  3. Department of Neurology, the 3rd Affiliated Hospital of Chengdu Medical College, Chengdu, Sichuan, China

    Fengqin Qin

  4. Clinical Trial Center, National Medical Products Administration Key Laboratory for Clinical Research and Evaluation of Innovative Drugs, West China Hospital of Sichuan University, Chengdu, Sichuan, China

    Yongji He

Authors
  1. Tingting Jia
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Contributions

All authors are grateful for participation in our research. CZ contributed to the conception and design of the work; CZ, CY, TJ managed the literature searches and analyses. CY, SH, LX and AL contributed to visualization; TJ and CY contributed to the drafting; FQ and YH accessed and verified the data. All authors have read and agreed to the published version of the manuscript.

Corresponding author

Correspondence to Chengcheng Zhang.

Ethics declarations

Competing interests

The authors declare no competing interests and financial relationships with commercial interests.

Ethics

This study exclusively used de-identified, publicly available human and animal datasets from previously published studies. All original studies were approved by their respective named institutional review boards or ethics committees, including the Institutional Review Board of Rush University Medical Center [46], Banner Sun Health Research Institute [47], University of California, Irvine [59], Gunma University Hospital [62, 63], and CPP Sud Méditerranée II (Marseille, France) [60]. All procedures were conducted in accordance with the Declaration of Helsinki and relevant institutional and national guidelines.

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Jia, T., Yuan, C., Hu, S. et al. MKRN1 as a prioritized drug target for postpartum depression: evidence from druggable proteome profiling and multi-layer validation. Transl Psychiatry (2026). https://doi.org/10.1038/s41398-026-03886-x

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  • Received: 11 January 2025

  • Revised: 18 December 2025

  • Accepted: 30 January 2026

  • Published: 10 February 2026

  • DOI: https://doi.org/10.1038/s41398-026-03886-x

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