Fig. 2: Scenario 1 results.
From: Leveraging haplotype information in heritability estimation and polygenic prediction
Heritability estimation and polygenic prediction in Scenario 1 across 10 phenotype simulations. The top row shows the SNP heritability estimates using the different GRMs across three subsets using either full or downsampled data, while the bottom row shows the squared correlations between the leave-one-out cross-validated polygenic predictions (cvBLUPs) and the simulated phenotypes. AFR: N = 10,000, EUR: N = 10,000, and ALL: N = 20,000. The true simulated h2 = 0.8 is displayed with a dashed line. Data are presented as mean values  ± standard deviations. Source data are provided as a Source Data file.
