Table 2 The ablation study on two public datasets

From: GraphBAN: An inductive graph-based approach for enhanced prediction of compound-protein interactions

Model/Modules

teacher

FF

BC

BindingDBa

BioSNAPa

Baseline

0.479 ± 0.044

0.515 ± 0.022

Model-1

0.505 ± 0.036

0.517 ± 0.026

Model-2

0.552 ± 0.072

0.670 ± 0.029

Model-3

0.563 ± 0.050

0.708 ± 0.040

GraphBAN

0.618 ± 0.036

0.751 ± 0.023

  1. aAUROC score of the average of five different runs with corresponding standard deviations. Source data are provided as a Source Data file.
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